This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000294.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR234HEM |
| Model: | BPNet |
| A [ | -1.28e-03 | -2.60e-04 | 2.23e-02 | -8.30e-04 | -2.90e-03 | 5.45e-02 | -2.26e-04 | 1.42e-02 | -1.71e-03 | -4.34e-04 | -7.29e-04 | -1.30e-03 | 7.59e-03 | -1.47e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.26e-02 | 1.17e-01 | -6.56e-04 | 3.93e-02 | 9.94e-03 | -2.71e-04 | -3.33e-05 | -3.11e-05 | -9.16e-05 | -7.39e-05 | -1.33e-04 | 5.73e-02 | -3.40e-04 | 1.60e-02 | ] |
| G [ | -1.17e-03 | -4.78e-05 | 5.28e-03 | 6.60e-03 | -1.60e-03 | 4.04e-04 | 1.08e-01 | 4.59e-02 | 3.11e-02 | 1.03e-01 | 6.86e-02 | -3.38e-04 | 3.49e-02 | 6.82e-03 | ] |
| T [ | -1.48e-03 | -2.08e-04 | -2.40e-03 | -8.89e-04 | 1.20e-02 | -1.12e-03 | -1.41e-04 | -2.10e-04 | 4.30e-03 | -2.13e-04 | -2.46e-04 | -1.56e-03 | -1.51e-03 | -5.76e-04 | ] |
| A [ | 1711 | 55 | 14694 | 924 | 3208 | 17665 | 140 | 8199 | 1033 | 132 | 575 | 2860 | 8510 | 2146 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 16862 | 20692 | 671 | 12356 | 8749 | 647 | 29 | 126 | 766 | 38 | 861 | 15507 | 1007 | 9996 | ] |
| G [ | 1100 | 7 | 3065 | 6914 | 1641 | 1509 | 20518 | 12271 | 11666 | 20540 | 17738 | 706 | 10305 | 6765 | ] |
| T [ | 1102 | 20 | 2344 | 580 | 7177 | 953 | 87 | 178 | 7309 | 64 | 1600 | 1701 | 953 | 1866 | ] |
