Detailed information of deep learning profile BP000295.1

This page shows detailed deep learning-derived predictions and motifs for NR2C2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2C2
Model ID: BP000295.1
Cell line/tissue: HepG2
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA1536.1 MA0504.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49116  
Source: ENCSR559ZKI
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.62e-04 -2.93e-04 -5.15e-04 -1.74e-04 1.04e-02 9.11e-03 1.90e-02 3.17e-06 0.00e+00 3.81e-05 3.13e-05 3.71e-02 4.55e-03 9.61e-04 -3.41e-04 ]
C [ 1.57e-03 1.13e-03 2.79e-03 8.91e-03 2.79e-03 7.78e-04 6.03e-05 1.01e-05 0.00e+00 -1.38e-07 3.70e-02 -6.81e-06 1.58e-03 1.17e-03 4.77e-04 ]
G [ 6.54e-03 6.36e-03 1.24e-03 5.76e-04 -1.03e-04 4.12e-03 7.87e-03 4.20e-02 3.74e-02 1.42e-06 -4.51e-06 4.12e-04 -2.57e-04 3.94e-03 7.98e-03 ]
T [ -7.39e-04 4.07e-04 3.22e-03 7.69e-04 8.52e-05 -1.42e-04 4.23e-07 -4.12e-06 4.01e-05 3.80e-02 9.64e-05 -3.91e-06 -2.39e-04 -1.40e-04 1.49e-04 ]

Frequency matrix

A [ 10303 10052 8022 8306 16490 17493 28449 661 352 259 668 42862 13281 13337 9584 ]
C [ 10931 10718 14298 17452 11961 5751 586 163 99 1840 40216 266 10607 8557 8252 ]
G [ 14058 14298 11787 9588 7945 17035 14934 43367 40972 1679 641 1455 14580 15324 18240 ]
T [ 9414 9637 10598 9359 8310 4425 736 514 3282 40926 3179 122 6237 7487 8629 ]

Alternative motif patterns (AMPs)

4 profiles found for the same TF (NR2C2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000260.1 NR2C2 ENCSR000EVS HepG2 Homo sapiens
BP000407.1 NR2C2 ENCSR454GVT WTC11 Homo sapiens
BP000895.1 NR2C2 ENCSR516SWI K562 Homo sapiens
BP001251.1 NR2C2 ENCSR750LYM K562 Homo sapiens
Showing 4 profiles of page 1 from 1 pages
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