Detailed information of deep learning profile BP000295.1

This page shows detailed deep learning-derived predictions and motifs for NR2C2 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR2C2
Model ID: BP000295.1
Cell line/tissue: HepG2
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Best Match(es): MA1536.1 MA0504.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P49116  
Source: ENCSR559ZKI
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.49e-04 -1.40e-04 -2.39e-04 -3.91e-06 9.64e-05 3.80e-02 4.01e-05 -4.12e-06 4.23e-07 -1.42e-04 8.52e-05 7.69e-04 3.22e-03 4.07e-04 -7.39e-04 ]
C [ 7.98e-03 3.94e-03 -2.57e-04 4.12e-04 -4.51e-06 1.42e-06 3.74e-02 4.20e-02 7.87e-03 4.12e-03 -1.03e-04 5.76e-04 1.24e-03 6.36e-03 6.54e-03 ]
G [ 4.77e-04 1.17e-03 1.58e-03 -6.81e-06 3.70e-02 -1.38e-07 0.00e+00 1.01e-05 6.03e-05 7.78e-04 2.79e-03 8.91e-03 2.79e-03 1.13e-03 1.57e-03 ]
T [ -3.41e-04 9.61e-04 4.55e-03 3.71e-02 3.13e-05 3.81e-05 0.00e+00 3.17e-06 1.90e-02 9.11e-03 1.04e-02 -1.74e-04 -5.15e-04 -2.93e-04 -1.62e-04 ]

Frequency matrix

A [ 8629 7487 6237 122 3179 40926 3282 514 736 4425 8310 9359 10598 9637 9414 ]
C [ 18240 15324 14580 1455 641 1679 40972 43367 14934 17035 7945 9588 11787 14298 14058 ]
G [ 8252 8557 10607 266 40216 1840 99 163 586 5751 11961 17452 14298 10718 10931 ]
T [ 9584 13337 13281 42862 668 259 352 661 28449 17493 16490 8306 8022 10052 10303 ]

Alternative motif patterns (AMPs)

4 profiles found for the same TF (NR2C2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000260.1 NR2C2 ENCSR000EVS HepG2 Homo sapiens
BP000407.1 NR2C2 ENCSR454GVT WTC11 Homo sapiens
BP000895.1 NR2C2 ENCSR516SWI K562 Homo sapiens
BP001251.1 NR2C2 ENCSR750LYM K562 Homo sapiens
Showing 4 profiles of page 1 from 1 pages
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