This page shows detailed deep learning-derived predictions and motifs for CTCF in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000297.1 |
| Cell line/tissue: | HepG2 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DUG |
| Model: | BPNet |
| A [ | -1.88e-03 | -1.34e-03 | 2.27e-02 | -1.26e-03 | -4.25e-03 | 7.21e-02 | -4.42e-04 | 8.09e-03 | -5.67e-03 | -1.13e-03 | -2.34e-03 | -2.97e-03 | 4.11e-03 | -3.07e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.65e-02 | 1.72e-01 | 6.58e-04 | 5.48e-02 | 1.63e-02 | -4.56e-04 | -1.27e-04 | -2.61e-04 | -5.46e-04 | -1.62e-04 | 2.80e-03 | 7.17e-02 | 1.11e-03 | 2.70e-02 | ] |
| G [ | -2.08e-03 | -6.06e-04 | 6.02e-03 | 1.05e-02 | -2.62e-03 | 1.49e-03 | 1.79e-01 | 8.49e-02 | 5.94e-02 | 1.57e-01 | 9.07e-02 | 7.17e-04 | 4.71e-02 | 8.59e-03 | ] |
| T [ | -2.67e-03 | -9.81e-04 | -5.97e-03 | -1.97e-03 | 1.99e-02 | -2.24e-03 | -4.13e-04 | -8.45e-04 | 1.92e-03 | -9.74e-04 | -9.42e-04 | -3.21e-03 | -3.69e-03 | -5.24e-04 | ] |
| A [ | 5911 | 1728 | 42067 | 4670 | 9916 | 55326 | 402 | 21175 | 5828 | 1505 | 3611 | 12155 | 23697 | 7982 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 54219 | 65539 | 3842 | 36559 | 28647 | 1784 | 107 | 608 | 2875 | 1168 | 6242 | 44690 | 7603 | 31446 | ] |
| G [ | 4270 | 491 | 10200 | 24912 | 6066 | 6362 | 67486 | 45215 | 39826 | 63960 | 52235 | 4836 | 31463 | 19848 | ] |
| T [ | 3859 | 500 | 12150 | 2118 | 23631 | 4787 | 264 | 1262 | 19730 | 1626 | 6171 | 6578 | 5495 | 8982 | ] |