This page shows detailed deep learning-derived predictions and motifs for SRF in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | SRF |
| Model ID: | BP000300.1 |
| Cell line/tissue: | GM12878 |
| Class: | MADS box factors |
| Family: | Responders to external signals (SRF/RLM1) |
| Best Match(es): | MA0083.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P11831 |
| Source: | ENCSR000BGE |
| Model: | BPNet |
| A [ | -2.23e-04 | 2.37e-08 | 1.12e-02 | 5.43e-04 | 2.99e-02 | 1.71e-05 | 1.44e-02 | 1.49e-03 | 3.22e-05 | -2.29e-04 | -2.43e-03 | -9.76e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.10e-02 | 7.79e-02 | -9.34e-04 | -3.27e-04 | -6.28e-04 | -1.88e-04 | -4.56e-04 | 2.33e-04 | 1.38e-05 | -8.74e-05 | 4.55e-03 | 1.54e-02 | ] |
| G [ | -9.17e-05 | 5.28e-06 | 1.53e-04 | -1.97e-05 | -8.80e-04 | -6.16e-05 | -9.81e-04 | -6.37e-04 | 6.80e-02 | 6.77e-02 | 3.60e-03 | -3.05e-04 | ] |
| T [ | -2.11e-04 | -4.32e-05 | 6.43e-03 | 3.59e-02 | 4.09e-04 | 4.47e-02 | 8.62e-03 | 2.20e-02 | -1.73e-05 | -4.01e-04 | 2.02e-04 | -9.92e-04 | ] |
