This page shows detailed deep learning-derived predictions and motifs for CTCF in spleen using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000302.1 |
| Cell line/tissue: | spleen |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR482PMN |
| Model: | BPNet |
| A [ | -9.79e-04 | -4.64e-04 | 2.51e-02 | -1.50e-03 | -4.67e-03 | 6.75e-02 | -2.89e-04 | 1.55e-02 | -2.80e-03 | -7.05e-04 | -1.15e-03 | -2.58e-03 | 8.24e-03 | -2.36e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.11e-02 | 1.55e-01 | -4.90e-04 | 5.71e-02 | 1.54e-02 | -1.80e-04 | -2.60e-05 | -2.21e-05 | 9.12e-05 | -2.52e-05 | 2.67e-04 | 7.55e-02 | -4.11e-04 | 2.50e-02 | ] |
| G [ | -1.55e-03 | -1.29e-04 | 5.87e-03 | 1.13e-02 | -1.74e-03 | 6.87e-04 | 1.54e-01 | 6.18e-02 | 4.51e-02 | 1.43e-01 | 9.44e-02 | -3.21e-04 | 4.46e-02 | 9.87e-03 | ] |
| T [ | -2.39e-03 | -3.25e-04 | -4.64e-03 | -1.54e-03 | 1.50e-02 | -1.96e-03 | -1.92e-04 | -3.75e-04 | 5.34e-03 | -4.49e-04 | -4.12e-04 | -2.58e-03 | -2.41e-03 | -8.30e-04 | ] |
| A [ | 3294 | 14 | 24666 | 1934 | 5742 | 30474 | 271 | 13111 | 2379 | 711 | 1436 | 5543 | 14043 | 4038 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 29449 | 37034 | 1652 | 21630 | 15593 | 1267 | 70 | 422 | 1969 | 556 | 2348 | 25957 | 2805 | 17327 | ] |
| G [ | 2184 | 9 | 5845 | 12426 | 3086 | 3117 | 36601 | 23072 | 20610 | 35152 | 30074 | 2146 | 17870 | 11717 | ] |
| T [ | 2136 | 6 | 4900 | 1073 | 12642 | 2205 | 121 | 458 | 12105 | 644 | 3205 | 3417 | 2346 | 3981 | ] |
