This page shows detailed deep learning-derived predictions and motifs for CTCF in OCI-LY1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000305.1 |
| Cell line/tissue: | OCI-LY1 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR072EUE |
| Model: | BPNet |
| A [ | -7.23e-04 | -3.29e-03 | -2.87e-03 | -1.75e-04 | -5.75e-04 | 5.70e-03 | -6.00e-04 | -3.85e-04 | -2.11e-03 | 1.81e-02 | -2.24e-03 | -4.86e-03 | -9.92e-04 | -2.61e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.30e-03 | 5.20e-02 | 1.25e-04 | 9.61e-02 | 1.45e-01 | 5.18e-02 | 6.95e-02 | 1.55e-01 | 8.83e-04 | -1.76e-03 | 1.07e-02 | 6.07e-03 | -5.25e-04 | -1.58e-03 | ] |
| G [ | 3.12e-02 | 8.06e-05 | 8.31e-02 | 1.58e-03 | -5.75e-05 | -2.94e-04 | -2.33e-04 | -7.56e-05 | -3.15e-04 | 1.18e-02 | 4.59e-02 | 5.68e-04 | 1.45e-01 | 7.37e-02 | ] |
| T [ | -2.55e-03 | 6.54e-03 | -3.48e-03 | -1.67e-03 | -7.22e-04 | -4.52e-03 | 1.10e-02 | -3.69e-04 | 6.35e-02 | -4.35e-03 | -1.32e-03 | 1.86e-02 | -1.23e-03 | -1.61e-03 | ] |
| A [ | 5211 | 2601 | 4165 | 2236 | 558 | 18384 | 495 | 376 | 3965 | 18110 | 2076 | 8511 | 714 | 3975 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 14833 | 25961 | 1150 | 47932 | 49527 | 27179 | 32865 | 49771 | 4738 | 5130 | 18463 | 7330 | 782 | 3863 | ] |
| G [ | 25963 | 2112 | 39210 | 333 | 135 | 1801 | 283 | 135 | 1492 | 19029 | 26315 | 3036 | 47673 | 37387 | ] |
| T [ | 4876 | 20210 | 6358 | 381 | 663 | 3518 | 17240 | 601 | 40688 | 8614 | 4029 | 32006 | 1714 | 5658 | ] |
