Detailed information of deep learning profile BP000306.1

This page shows detailed deep learning-derived predictions and motifs for HNF1A in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: HNF1A
Model ID: BP000306.1
Cell line/tissue: HepG2
Class: Homeo domain factors
Family: POU domain factors
Best Match(es): MA0046.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P20823  
Source: ENCSR800QIT
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.03e-03 -2.80e-03 -2.63e-03 9.83e-02 6.51e-02 2.54e-03 -1.84e-03 6.18e-02 -4.06e-04 -8.54e-05 6.42e-02 8.06e-02 -1.96e-04 -3.80e-03 ]
C [ -2.04e-03 -1.46e-03 -6.26e-04 -1.41e-04 -1.87e-03 -3.13e-04 5.37e-03 -3.62e-04 -3.52e-05 -1.31e-05 -4.84e-04 -1.59e-04 7.11e-02 1.02e-02 ]
G [ 3.56e-02 -2.34e-03 -3.41e-03 -1.43e-04 -7.51e-04 -6.99e-04 4.50e-03 -1.22e-04 -6.56e-04 -1.63e-05 -1.76e-04 -4.00e-04 -2.39e-04 -5.23e-04 ]
T [ -3.07e-03 4.98e-02 3.87e-02 -8.58e-04 -9.56e-04 5.44e-02 -4.05e-04 1.31e-03 8.45e-02 1.19e-01 -9.88e-04 -2.48e-04 8.89e-05 8.77e-03 ]

Frequency matrix

A [ 2522 916 2063 11346 9876 3083 2226 9268 530 47 10089 11271 861 2603 ]
C [ 627 1381 1460 52 1351 504 3931 135 76 156 280 366 10338 4433 ]
G [ 7559 1370 880 743 257 176 3590 598 851 12 794 623 225 582 ]
T [ 1765 8805 8069 331 988 8709 2725 2471 11015 12257 1310 212 1048 4853 ]

1 profiles found for the same TF (HNF1A) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000902.1 HNF1A ENCSR633HRJ HepG2 Homo sapiens
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