Detailed information of deep learning profile BP000310.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000310.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR255CTA
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.51e-03 -5.18e-04 2.88e-03 3.37e-02 -2.63e-05 1.59e-02 -7.07e-04 1.72e-03 3.63e-03 -7.45e-04 3.09e-05 -1.24e-04 1.72e-03 2.07e-05 -5.67e-04 ]
C [ 1.18e-05 -1.74e-04 -9.65e-04 -2.39e-04 5.04e-02 -7.85e-04 3.40e-04 -5.27e-04 2.82e-05 1.09e-03 -1.05e-05 -2.63e-05 -6.70e-04 4.04e-02 2.44e-03 ]
G [ 4.16e-03 2.85e-02 -8.02e-04 -2.60e-04 -6.30e-05 8.14e-04 1.64e-03 -6.39e-04 5.42e-04 -2.67e-04 5.65e-02 -7.48e-07 -8.10e-04 -3.89e-06 -5.43e-05 ]
T [ -1.13e-03 -1.77e-04 1.20e-03 -4.33e-04 3.98e-05 -1.18e-03 1.10e-03 1.18e-03 -6.80e-04 1.92e-02 -8.85e-07 4.08e-02 4.66e-03 -1.47e-05 8.46e-03 ]

Frequency matrix

A [ 2753 1143 2408 5070 2 4417 1193 2000 2009 1004 9 193 1557 205 1117 ]
C [ 406 248 1112 327 6538 363 1570 1268 1778 345 1 57 1224 6066 2226 ]
G [ 2171 4199 1438 360 4 399 2005 1275 1588 166 6544 29 841 25 97 ]
T [ 1226 965 1599 799 12 1377 1788 2013 1181 5041 2 6277 2934 260 3116 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages