Detailed information of deep learning profile BP000310.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000310.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR255CTA
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.46e-03 -1.47e-05 4.66e-03 4.08e-02 -8.85e-07 1.92e-02 -6.80e-04 1.18e-03 1.10e-03 -1.18e-03 3.98e-05 -4.33e-04 1.20e-03 -1.77e-04 -1.13e-03 ]
C [ -5.43e-05 -3.89e-06 -8.10e-04 -7.48e-07 5.65e-02 -2.67e-04 5.42e-04 -6.39e-04 1.64e-03 8.14e-04 -6.30e-05 -2.60e-04 -8.02e-04 2.85e-02 4.16e-03 ]
G [ 2.44e-03 4.04e-02 -6.70e-04 -2.63e-05 -1.05e-05 1.09e-03 2.82e-05 -5.27e-04 3.40e-04 -7.85e-04 5.04e-02 -2.39e-04 -9.65e-04 -1.74e-04 1.18e-05 ]
T [ -5.67e-04 2.07e-05 1.72e-03 -1.24e-04 3.09e-05 -7.45e-04 3.63e-03 1.72e-03 -7.07e-04 1.59e-02 -2.63e-05 3.37e-02 2.88e-03 -5.18e-04 3.51e-03 ]

Frequency matrix

A [ 3116 260 2934 6277 2 5041 1181 2013 1788 1377 12 799 1599 965 1226 ]
C [ 97 25 841 29 6544 166 1588 1275 2005 399 4 360 1438 4199 2171 ]
G [ 2226 6066 1224 57 1 345 1778 1268 1570 363 6538 327 1112 248 406 ]
T [ 1117 205 1557 193 9 1004 2009 2000 1193 4417 2 5070 2408 1143 2753 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages