Detailed information of deep learning profile BP000311.1

This page shows detailed deep learning-derived predictions and motifs for ATF2 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF2
Model ID: BP000311.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
Best Match(es): MA1632.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P15336  
Source: ENCSR961PPA
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.97e-02 -1.39e-04 -1.23e-04 1.16e-01 2.85e-07 1.44e-02 -2.74e-05 8.51e-04 9.82e-02 -3.60e-04 ]
C [ -9.06e-04 4.24e-05 -3.67e-04 -3.57e-06 1.40e-01 -2.29e-03 -4.42e-06 1.01e-01 -7.76e-06 4.16e-03 ]
G [ 2.03e-03 -1.94e-05 7.75e-02 -1.24e-05 -9.31e-06 4.04e-02 -9.68e-06 -1.47e-05 3.69e-05 -7.37e-04 ]
T [ -4.06e-04 9.72e-02 7.23e-03 -1.38e-05 9.87e-06 -8.92e-05 1.24e-01 -1.59e-05 -3.34e-05 5.49e-02 ]

Frequency matrix

A [ 17923 236 190 23342 6 12974 128 2072 23041 333 ]
C [ 1326 286 282 6 23261 1617 68 21195 61 4771 ]
G [ 3881 67 18776 55 100 8668 23 125 208 1188 ]
T [ 384 22925 4266 111 147 255 23295 121 204 17222 ]

Alternative motif patterns (AMPs)

7 profiles found for the same TF (ATF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000308.1 ATF2 ENCSR047BUZ HepG2 Homo sapiens
BP000519.1 ATF2 ENCSR217HTK HEK293 Homo sapiens
BP000753.1 ATF2 ENCSR000BQU H1 Homo sapiens
BP000803.1 ATF2 ENCSR014ARU K562 Homo sapiens
BP001049.1 ATF2 ENCSR869IUD K562 Homo sapiens
BP001124.1 ATF2 ENCSR000BQK GM12878 Homo sapiens
BP001195.1 ATF2 ENCSR908HWZ HepG2 Homo sapiens
Showing 7 profiles of page 1 from 1 pages
  • 1 (current)