Detailed information of deep learning profile BP000311.1

This page shows detailed deep learning-derived predictions and motifs for ATF2 in GM12878 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: ATF2
Model ID: BP000311.1
Cell line/tissue: GM12878
Class: Basic leucine zipper factors (bZIP)
Family: Jun-related
Best Match(es): MA1632.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P15336  
Source: ENCSR961PPA
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.49e-02 -3.34e-05 -1.59e-05 1.24e-01 -8.92e-05 9.87e-06 -1.38e-05 7.23e-03 9.72e-02 -4.06e-04 ]
C [ -7.37e-04 3.69e-05 -1.47e-05 -9.68e-06 4.04e-02 -9.31e-06 -1.24e-05 7.75e-02 -1.94e-05 2.03e-03 ]
G [ 4.16e-03 -7.76e-06 1.01e-01 -4.42e-06 -2.29e-03 1.40e-01 -3.57e-06 -3.67e-04 4.24e-05 -9.06e-04 ]
T [ -3.60e-04 9.82e-02 8.51e-04 -2.74e-05 1.44e-02 2.85e-07 1.16e-01 -1.23e-04 -1.39e-04 5.97e-02 ]

Frequency matrix

A [ 17222 204 121 23295 255 147 111 4266 22925 384 ]
C [ 1188 208 125 23 8668 100 55 18776 67 3881 ]
G [ 4771 61 21195 68 1617 23261 6 282 286 1326 ]
T [ 333 23041 2072 128 12974 6 23342 190 236 17923 ]

Alternative motif patterns (AMPs)

7 profiles found for the same TF (ATF2) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000308.1 ATF2 ENCSR047BUZ HepG2 Homo sapiens
BP000519.1 ATF2 ENCSR217HTK HEK293 Homo sapiens
BP000753.1 ATF2 ENCSR000BQU H1 Homo sapiens
BP000803.1 ATF2 ENCSR014ARU K562 Homo sapiens
BP001049.1 ATF2 ENCSR869IUD K562 Homo sapiens
BP001124.1 ATF2 ENCSR000BQK GM12878 Homo sapiens
BP001195.1 ATF2 ENCSR908HWZ HepG2 Homo sapiens
Showing 7 profiles of page 1 from 1 pages
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