This page shows detailed deep learning-derived predictions and motifs for CTCF in stomach using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000314.1 |
| Cell line/tissue: | stomach |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR549WAU |
| Model: | BPNet |
| A [ | -1.19e-03 | -2.52e-04 | 2.36e-02 | -1.09e-03 | -3.48e-03 | 5.78e-02 | -2.25e-04 | 1.25e-02 | -1.81e-03 | -4.83e-04 | -7.33e-04 | -1.46e-03 | 7.85e-03 | -1.94e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 6.30e-02 | 1.18e-01 | -7.62e-04 | 4.16e-02 | 1.08e-02 | -2.69e-04 | -2.63e-05 | 4.58e-06 | -1.17e-04 | -7.93e-05 | -2.37e-04 | 5.52e-02 | -5.27e-04 | 1.71e-02 | ] |
| G [ | -1.29e-03 | -8.45e-05 | 4.57e-03 | 7.50e-03 | -1.69e-03 | 1.12e-04 | 1.13e-01 | 4.51e-02 | 2.76e-02 | 1.05e-01 | 6.76e-02 | -4.40e-04 | 3.32e-02 | 8.05e-03 | ] |
| T [ | -1.60e-03 | -2.56e-04 | -2.97e-03 | -9.09e-04 | 1.21e-02 | -1.33e-03 | -1.58e-04 | -2.38e-04 | 4.76e-03 | -3.01e-04 | -2.11e-04 | -1.50e-03 | -1.70e-03 | -4.85e-04 | ] |
| A [ | 2208 | 38 | 18338 | 1183 | 3943 | 22007 | 113 | 9854 | 1469 | 317 | 853 | 3769 | 10470 | 2770 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 20843 | 25693 | 837 | 15258 | 11050 | 700 | 20 | 213 | 1102 | 104 | 1213 | 18570 | 1503 | 12226 | ] |
| G [ | 1329 | 7 | 3503 | 8673 | 1914 | 1767 | 25569 | 15458 | 13825 | 25086 | 21693 | 1080 | 12476 | 8320 | ] |
| T [ | 1377 | 18 | 3078 | 641 | 8849 | 1282 | 54 | 231 | 9359 | 249 | 1998 | 2337 | 1307 | 2440 | ] |
