This page shows detailed deep learning-derived predictions and motifs for CTCF in H1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000316.1 |
| Cell line/tissue: | H1 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DLK |
| Model: | BPNet |
| A [ | -2.16e-03 | -4.33e-03 | -3.99e-03 | -1.87e-03 | -1.22e-03 | -2.16e-03 | -9.91e-04 | -6.01e-04 | -2.84e-03 | 9.23e-03 | -2.44e-03 | -8.40e-03 | -1.37e-03 | -3.09e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.45e-02 | 6.35e-02 | 1.49e-03 | 1.04e-01 | 1.62e-01 | 6.05e-02 | 8.78e-02 | 1.73e-01 | 3.79e-03 | -4.59e-04 | 1.76e-02 | 7.27e-03 | -3.65e-04 | -4.54e-04 | ] |
| G [ | 3.56e-02 | 2.12e-03 | 8.49e-02 | 4.33e-03 | 1.24e-04 | 1.17e-05 | -1.26e-04 | -8.23e-05 | -9.47e-05 | 2.36e-02 | 5.36e-02 | 2.78e-03 | 1.59e-01 | 9.51e-02 | ] |
| T [ | -3.91e-03 | 1.89e-04 | -5.61e-03 | -2.53e-03 | -1.59e-03 | -6.94e-03 | 1.89e-03 | -5.11e-04 | 4.46e-02 | -6.18e-03 | -2.08e-03 | 1.16e-02 | -2.19e-03 | -3.41e-03 | ] |
| A [ | 5289 | 3265 | 4040 | 3380 | 790 | 12842 | 824 | 327 | 4525 | 14120 | 1799 | 9690 | 410 | 2673 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 13855 | 25743 | 3100 | 39252 | 46488 | 28600 | 33961 | 47623 | 5844 | 5456 | 18664 | 7480 | 550 | 3989 | ] |
| G [ | 24651 | 4430 | 33361 | 4026 | 466 | 2262 | 461 | 106 | 1756 | 21541 | 24521 | 3772 | 46366 | 37982 | ] |
| T [ | 4767 | 15124 | 8062 | 1905 | 817 | 4859 | 13316 | 506 | 36437 | 7445 | 3578 | 27619 | 1236 | 3918 | ] |