This page shows detailed deep learning-derived predictions and motifs for CTCF in middle frontal area 46 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000319.1 |
| Cell line/tissue: | middle frontal area 46 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR423ZUM |
| Model: | BPNet |
| A [ | -2.00e-03 | -8.00e-04 | 2.36e-02 | -2.32e-03 | -6.31e-03 | 6.91e-02 | -4.51e-04 | 1.80e-02 | -4.37e-03 | -7.87e-04 | -1.59e-03 | -3.95e-03 | 9.87e-03 | -3.14e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.95e-02 | 1.88e-01 | -1.32e-04 | 6.82e-02 | 1.93e-02 | 1.59e-05 | -2.42e-05 | -2.16e-05 | 3.34e-04 | 1.06e-05 | 2.39e-04 | 1.04e-01 | -1.02e-03 | 3.26e-02 | ] |
| G [ | -1.94e-03 | -3.25e-04 | 7.52e-03 | 1.43e-02 | -2.32e-03 | 1.10e-03 | 1.96e-01 | 7.61e-02 | 5.89e-02 | 1.85e-01 | 1.24e-01 | -7.28e-04 | 5.95e-02 | 1.45e-02 | ] |
| T [ | -3.26e-03 | -6.21e-04 | -7.21e-03 | -2.40e-03 | 2.02e-02 | -2.93e-03 | -3.16e-04 | -5.27e-04 | 6.85e-03 | -6.18e-04 | -6.50e-04 | -3.71e-03 | -3.78e-03 | -1.82e-03 | ] |
| A [ | 3926 | 27 | 26888 | 2384 | 6268 | 32843 | 112 | 15861 | 2197 | 518 | 1121 | 5605 | 16384 | 4069 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 30759 | 40247 | 1945 | 22469 | 15665 | 1528 | 17 | 666 | 1925 | 143 | 1792 | 30059 | 2162 | 19159 | ] |
| G [ | 2871 | 19 | 6033 | 14147 | 3611 | 3232 | 40146 | 23280 | 22126 | 39283 | 33986 | 1379 | 19622 | 12871 | ] |
| T [ | 2748 | 11 | 5438 | 1304 | 14760 | 2701 | 29 | 497 | 14055 | 360 | 3405 | 3260 | 2135 | 4204 | ] |
