Detailed information of deep learning profile BP000323.1

This page shows detailed deep learning-derived predictions and motifs for GABPA in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: GABPA
Model ID: BP000323.1
Cell line/tissue: HepG2
Class: Tryptophan cluster factors
Family: Ets-related
Best Match(es): MA0062.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q06546  
Source: ENCSR269TNX
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.03e-02 -1.05e-04 1.62e-04 -3.38e-06 1.36e-05 1.45e-05 -9.89e-05 -2.71e-04 -4.61e-04 ]
C [ -6.44e-04 2.48e-02 -3.28e-05 5.12e-06 7.69e-02 8.72e-02 -5.89e-06 5.68e-04 3.78e-03 ]
G [ 2.00e-03 -4.70e-05 3.13e-05 3.53e-05 2.87e-05 2.77e-05 4.12e-02 2.72e-02 -3.40e-04 ]
T [ -1.02e-03 2.26e-03 4.77e-02 7.07e-02 3.21e-06 -1.60e-06 1.92e-03 -1.61e-04 7.54e-03 ]

Frequency matrix

A [ 23943 1743 4227 337 200 36 1372 2376 5899 ]
C [ 9197 35656 1588 877 57235 57666 3520 12497 18938 ]
G [ 16771 6719 1474 411 129 33 28442 36582 12299 ]
T [ 7899 13692 50522 56185 246 75 24476 6355 20674 ]

13 profiles found for the same TF (GABPA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000192.1 GABPA ENCSR000BIW H1 Homo sapiens
BP000204.1 GABPA ENCSR350ORK liver Homo sapiens
BP000347.1 GABPA ENCSR331HPA GM12878 Homo sapiens
BP000391.1 GABPA ENCSR038RXU MCF-7 Homo sapiens
BP000406.1 GABPA ENCSR000BTG SK-N-SH Homo sapiens
BP000563.1 GABPA ENCSR000BLO K562 Homo sapiens
BP000582.1 GABPA ENCSR000BUK MCF-7 Homo sapiens
BP000699.1 GABPA ENCSR000BTK HL-60 Homo sapiens
BP000823.1 GABPA ENCSR000BJK HepG2 Homo sapiens
BP000840.1 GABPA ENCSR038GMB liver Homo sapiens
Showing 10 profiles of page 1 from 2 pages