Detailed information of deep learning profile BP000324.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM12891 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000324.1
Cell line/tissue: GM12891
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EAI
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.42e-04 -1.18e-06 -1.57e-05 1.28e-02 1.55e-02 3.60e-03 -9.43e-05 -2.68e-04 -1.73e-04 -5.74e-04 -1.95e-03 ]
C [ -3.95e-05 -6.18e-08 -1.58e-05 -6.79e-04 -2.99e-03 -8.98e-04 -2.63e-04 6.83e-03 6.30e-02 5.99e-02 1.45e-02 ]
G [ 6.43e-02 9.73e-02 7.00e-02 2.18e-02 -4.50e-04 -4.80e-04 -3.93e-04 -7.25e-04 -8.63e-05 -2.11e-05 9.85e-04 ]
T [ -5.29e-04 8.65e-06 1.77e-03 -5.71e-04 1.11e-03 4.47e-02 6.36e-02 3.42e-02 1.70e-03 -3.01e-04 -3.74e-03 ]

Frequency matrix

A [ 691 13 231 6957 7796 2551 295 705 708 1201 5355 ]
C [ 430 23 43 747 4622 861 625 4582 14570 13901 7006 ]
G [ 15875 18420 16025 9040 2673 825 658 538 320 884 2709 ]
T [ 1591 131 2288 1844 3496 14350 17009 12762 2989 2602 3517 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000234.1 RELA ENCSR000EBD GM18951 Homo sapiens
BP000338.1 RELA ENCSR000EBM GM19193 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000485.1 RELA ENCSR580HOI HepG2 Homo sapiens
BP000574.1 RELA ENCSR000EAQ GM15510 Homo sapiens
BP000725.1 RELA ENCSR000EAN GM12892 Homo sapiens
BP000749.1 RELA ENCSR664POU GM12878 Homo sapiens
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