Detailed information of deep learning profile BP000324.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM12891 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000324.1
Cell line/tissue: GM12891
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EAI
Model: BPNet

Contribution weight matrix (CWM)

A [ -3.74e-03 -3.01e-04 1.70e-03 3.42e-02 6.36e-02 4.47e-02 1.11e-03 -5.71e-04 1.77e-03 8.65e-06 -5.29e-04 ]
C [ 9.85e-04 -2.11e-05 -8.63e-05 -7.25e-04 -3.93e-04 -4.80e-04 -4.50e-04 2.18e-02 7.00e-02 9.73e-02 6.43e-02 ]
G [ 1.45e-02 5.99e-02 6.30e-02 6.83e-03 -2.63e-04 -8.98e-04 -2.99e-03 -6.79e-04 -1.58e-05 -6.18e-08 -3.95e-05 ]
T [ -1.95e-03 -5.74e-04 -1.73e-04 -2.68e-04 -9.43e-05 3.60e-03 1.55e-02 1.28e-02 -1.57e-05 -1.18e-06 -4.42e-04 ]

Frequency matrix

A [ 3517 2602 2989 12762 17009 14350 3496 1844 2288 131 1591 ]
C [ 2709 884 320 538 658 825 2673 9040 16025 18420 15875 ]
G [ 7006 13901 14570 4582 625 861 4622 747 43 23 430 ]
T [ 5355 1201 708 705 295 2551 7796 6957 231 13 691 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000234.1 RELA ENCSR000EBD GM18951 Homo sapiens
BP000338.1 RELA ENCSR000EBM GM19193 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000485.1 RELA ENCSR580HOI HepG2 Homo sapiens
BP000574.1 RELA ENCSR000EAQ GM15510 Homo sapiens
BP000725.1 RELA ENCSR000EAN GM12892 Homo sapiens
BP000749.1 RELA ENCSR664POU GM12878 Homo sapiens
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