This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus squamous epithelium using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000326.1 |
| Cell line/tissue: | esophagus squamous epithelium |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR266UTR |
| Model: | BPNet |
| A [ | 2.06e-03 | -1.40e-03 | -3.96e-04 | 1.99e-02 | -7.71e-04 | -3.27e-03 | 5.26e-02 | -1.74e-04 | 1.12e-02 | -1.74e-03 | -3.61e-04 | -7.51e-04 | -1.78e-03 | 6.94e-03 | -1.96e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | -1.47e-03 | 6.27e-02 | 1.11e-01 | -2.15e-04 | 4.15e-02 | 1.11e-02 | -7.84e-05 | -7.91e-06 | 1.18e-05 | 1.29e-04 | 4.41e-06 | -1.12e-04 | 6.50e-02 | -6.02e-04 | 2.04e-02 | ] |
| G [ | 1.63e-02 | -8.56e-04 | -1.38e-04 | 5.39e-03 | 5.21e-03 | -1.46e-03 | -1.85e-04 | 1.06e-01 | 4.64e-02 | 3.13e-02 | 1.08e-01 | 7.60e-02 | -4.17e-04 | 4.09e-02 | 7.61e-03 | ] |
| T [ | -3.27e-03 | -1.52e-03 | -2.68e-04 | -2.77e-03 | -8.89e-04 | 9.73e-03 | -1.13e-03 | -1.20e-04 | -1.84e-04 | 3.22e-03 | -2.38e-04 | -7.26e-04 | -1.76e-03 | -1.52e-03 | -8.03e-04 | ] |
| A [ | 5433 | 1679 | 271 | 13954 | 891 | 2907 | 17359 | 116 | 7782 | 872 | 187 | 489 | 2445 | 8032 | 1878 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 2023 | 16362 | 19837 | 737 | 12329 | 8743 | 731 | 32 | 133 | 856 | 44 | 627 | 15846 | 716 | 10361 | ] |
| G [ | 9520 | 1119 | 87 | 3407 | 6555 | 1670 | 1294 | 20069 | 12220 | 11233 | 19928 | 17690 | 522 | 10759 | 6442 | ] |
| T [ | 3290 | 1106 | 71 | 2168 | 491 | 6947 | 882 | 49 | 131 | 7304 | 107 | 1461 | 1454 | 758 | 1585 | ] |
