This page shows detailed deep learning-derived predictions and motifs for CTCF in transverse colon using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000328.1 |
| Cell line/tissue: | transverse colon |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR102CSD |
| Model: | BPNet |
| A [ | -9.16e-04 | -2.21e-03 | -2.07e-03 | -2.27e-04 | -2.54e-04 | 6.63e-03 | -3.64e-04 | -1.82e-04 | -1.77e-03 | 1.71e-02 | -1.57e-03 | -4.02e-03 | -3.74e-04 | -2.37e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.45e-03 | 3.98e-02 | -9.52e-04 | 8.83e-02 | 1.31e-01 | 3.73e-02 | 5.86e-02 | 1.50e-01 | 3.49e-04 | -1.77e-03 | 1.19e-02 | 4.15e-03 | -1.46e-04 | -1.58e-03 | ] |
| G [ | 2.25e-02 | -6.64e-04 | 7.21e-02 | -2.97e-04 | 4.89e-06 | -5.53e-05 | -4.45e-05 | -4.05e-05 | -1.79e-04 | 1.42e-02 | 5.24e-02 | -6.77e-04 | 1.55e-01 | 7.77e-02 | ] |
| T [ | -2.08e-03 | 8.94e-03 | -1.59e-03 | -8.27e-04 | -5.43e-04 | -2.80e-03 | 1.58e-02 | -3.14e-04 | 6.91e-02 | -4.63e-03 | -1.40e-03 | 2.35e-02 | -3.78e-04 | -1.15e-03 | ] |
| A [ | 3433 | 1885 | 2886 | 2618 | 170 | 12833 | 426 | 95 | 1982 | 11865 | 1032 | 5032 | 0 | 2216 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 11516 | 17602 | 1048 | 31218 | 35168 | 18900 | 21076 | 35387 | 2579 | 3278 | 12956 | 4696 | 0 | 2468 | ] |
| G [ | 16956 | 1841 | 26696 | 1101 | 72 | 1667 | 466 | 43 | 1072 | 15178 | 19705 | 1743 | 35712 | 27572 | ] |
| T [ | 3808 | 14385 | 5083 | 776 | 303 | 2312 | 13746 | 188 | 30080 | 5392 | 2020 | 24243 | 1 | 3457 | ] |
