Detailed information of deep learning profile BP000330.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000330.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR024CNP
Model: BPNet

Contribution weight matrix (CWM)

A [ 1.17e-05 -1.53e-03 -1.41e-05 -8.64e-05 2.83e-04 4.09e-06 4.71e-07 -1.17e-03 -3.58e-04 -5.87e-04 ]
C [ -6.46e-04 1.78e-02 -1.03e-06 -5.01e-06 -4.46e-06 2.67e-05 6.25e-06 2.04e-02 -1.69e-04 -2.84e-04 ]
G [ 2.35e-02 -6.05e-05 7.28e-02 7.46e-03 4.83e-02 5.88e-02 7.55e-02 3.01e-05 4.71e-02 1.59e-02 ]
T [ -2.79e-04 -2.66e-04 -1.27e-06 1.86e-02 -3.92e-05 -1.60e-06 -6.65e-07 1.93e-03 -3.24e-04 2.04e-03 ]

Frequency matrix

A [ 20789 24976 1237 4724 13395 652 92 27218 6058 9648 ]
C [ 19834 46731 435 8790 1755 2245 135 57595 3682 11165 ]
G [ 77961 25649 126234 59406 111789 123194 127765 9722 113697 85318 ]
T [ 9550 30778 228 55214 1195 2043 142 33600 4697 22002 ]

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
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