Detailed information of deep learning profile BP000330.1

This page shows detailed deep learning-derived predictions and motifs for EGR1 in K562 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: EGR1
Model ID: BP000330.1
Cell line/tissue: K562
Class: C2H2 zinc finger factors
Family: Three-zinc finger Kruppel-related
Best Match(es): MA0162.5
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P18146  
Source: ENCSR024CNP
Model: BPNet

Contribution weight matrix (CWM)

A [ 2.04e-03 -3.24e-04 1.93e-03 -6.65e-07 -1.60e-06 -3.92e-05 1.86e-02 -1.27e-06 -2.66e-04 -2.79e-04 ]
C [ 1.59e-02 4.71e-02 3.01e-05 7.55e-02 5.88e-02 4.83e-02 7.46e-03 7.28e-02 -6.05e-05 2.35e-02 ]
G [ -2.84e-04 -1.69e-04 2.04e-02 6.25e-06 2.67e-05 -4.46e-06 -5.01e-06 -1.03e-06 1.78e-02 -6.46e-04 ]
T [ -5.87e-04 -3.58e-04 -1.17e-03 4.71e-07 4.09e-06 2.83e-04 -8.64e-05 -1.41e-05 -1.53e-03 1.17e-05 ]

Frequency matrix

A [ 22002 4697 33600 142 2043 1195 55214 228 30778 9550 ]
C [ 85318 113697 9722 127765 123194 111789 59406 126234 25649 77961 ]
G [ 11165 3682 57595 135 2245 1755 8790 435 46731 19834 ]
T [ 9648 6058 27218 92 652 13395 4724 1237 24976 20789 ]

10 profiles found for the same TF (EGR1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000348.1 EGR1 ENCSR000BMQ GM12878 Homo sapiens
BP000440.1 EGR1 ENCSR000BRZ HCT116 Homo sapiens
BP000470.1 EGR1 ENCSR026GSW HepG2 Homo sapiens
BP000507.1 EGR1 ENCSR211LTF K562 Homo sapiens
BP000628.1 EGR1 ENCSR736BUG liver Homo sapiens
BP000635.1 EGR1 ENCSR000BUX MCF-7 Homo sapiens
BP000770.1 EGR1 ENCSR000BNE K562 Homo sapiens
BP000794.1 EGR1 ENCSR000BJA H1 Homo sapiens
BP001030.1 EGR1 ENCSR290ZOS liver Homo sapiens
BP001164.1 EGR1 ENCSR000BSQ Ishikawa Homo sapiens
Showing 10 profiles of page 1 from 1 pages
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