Detailed information of deep learning profile BP000332.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000332.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR720DXT
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.75e-03 2.11e-05 6.56e-03 5.89e-02 2.62e-06 2.88e-02 -7.12e-04 1.97e-03 1.82e-03 -2.25e-03 -6.70e-06 -7.10e-04 1.19e-03 -5.23e-04 -1.95e-03 ]
C [ -1.23e-04 2.25e-06 -1.48e-03 -1.36e-05 8.77e-02 -2.39e-04 1.05e-03 -7.21e-04 3.23e-03 2.02e-03 7.70e-06 -6.09e-04 -2.04e-04 3.56e-02 6.07e-03 ]
G [ 5.69e-03 6.23e-02 -5.36e-04 -2.58e-05 0.00e+00 1.41e-03 7.41e-04 -8.60e-04 8.45e-04 -1.39e-03 7.60e-02 -6.25e-04 -1.48e-03 -3.03e-04 -1.11e-04 ]
T [ -1.51e-03 3.40e-06 2.30e-03 -3.36e-05 4.18e-06 -5.80e-04 5.25e-03 2.94e-03 -8.48e-04 1.69e-02 1.42e-05 4.32e-02 3.46e-03 -6.54e-04 5.55e-03 ]

Frequency matrix

A [ 11710 969 10476 23617 0 19074 4186 7460 6707 5870 1 3545 6043 4874 4616 ]
C [ 546 76 3235 107 24857 542 6217 5098 7581 1659 0 2175 5828 13608 8200 ]
G [ 8049 23105 5114 248 2 1308 6702 4798 6112 1785 24862 1807 4574 1075 2088 ]
T [ 4559 714 6039 892 5 3940 7759 7508 4464 15551 1 17337 8420 5308 9960 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages