Detailed information of deep learning profile BP000332.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000332.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR720DXT
Model: BPNet

Contribution weight matrix (CWM)

A [ 8.75e-03 2.11e-05 6.56e-03 5.89e-02 2.62e-06 2.88e-02 -7.12e-04 1.97e-03 1.82e-03 -2.25e-03 -6.70e-06 -7.10e-04 1.19e-03 -5.23e-04 -1.95e-03 ]
C [ -1.23e-04 2.25e-06 -1.48e-03 -1.36e-05 8.77e-02 -2.39e-04 1.05e-03 -7.21e-04 3.23e-03 2.02e-03 7.70e-06 -6.09e-04 -2.04e-04 3.56e-02 6.07e-03 ]
G [ 5.69e-03 6.23e-02 -5.36e-04 -2.58e-05 0.00e+00 1.41e-03 7.41e-04 -8.60e-04 8.45e-04 -1.39e-03 7.60e-02 -6.25e-04 -1.48e-03 -3.03e-04 -1.11e-04 ]
T [ -1.51e-03 3.40e-06 2.30e-03 -3.36e-05 4.18e-06 -5.80e-04 5.25e-03 2.94e-03 -8.48e-04 1.69e-02 1.42e-05 4.32e-02 3.46e-03 -6.54e-04 5.55e-03 ]

Frequency matrix

A [ 11710 969 10476 23617 0 19074 4186 7460 6707 5870 1 3545 6043 4874 4616 ]
C [ 546 76 3235 107 24857 542 6217 5098 7581 1659 0 2175 5828 13608 8200 ]
G [ 8049 23105 5114 248 2 1308 6702 4798 6112 1785 24862 1807 4574 1075 2088 ]
T [ 4559 714 6039 892 5 3940 7759 7508 4464 15551 1 17337 8420 5308 9960 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000345.1 NR3C1 ENCSR385RUW A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages