Detailed information of deep learning profile BP000333.1

This page shows detailed deep learning-derived predictions and motifs for TBX3 in HepG2 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: TBX3
Model ID: BP000333.1
Cell line/tissue: HepG2
Class: T-Box factors
Family: TBX2-related factors
Best Match(es): MA1566.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: O15119  
Source: ENCSR238QRG
Model: BPNet

Contribution weight matrix (CWM)

A [ 4.87e-03 -2.00e-04 0.00e+00 1.36e-05 2.68e-05 4.10e-04 -5.42e-05 1.20e-02 5.11e-03 ]
C [ 8.18e-05 2.34e-04 7.09e-06 1.71e-04 3.19e-06 4.67e-06 2.70e-03 -1.46e-05 4.89e-04 ]
G [ -6.78e-05 5.35e-03 1.56e-02 0.00e+00 2.06e-02 -3.86e-05 1.95e-03 2.35e-04 -1.92e-04 ]
T [ -1.38e-04 5.35e-05 3.43e-05 1.24e-02 0.00e+00 9.36e-03 1.07e-03 1.04e-04 -1.19e-04 ]

Frequency matrix

A [ 10348 3833 83 591 0 2619 2301 16372 8194 ]
C [ 2910 1743 180 1930 0 2457 6664 451 3769 ]
G [ 4459 9581 20154 130 20694 766 6871 2058 5870 ]
T [ 2978 5538 278 18044 1 14853 4858 1814 2862 ]

1 profiles found for the same TF (TBX3) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001007.1 TBX3 ENCSR605YWG HepG2 Homo sapiens
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