Detailed information of deep learning profile BP000338.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM19193 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000338.1
Cell line/tissue: GM19193
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EBM
Model: BPNet

Contribution weight matrix (CWM)

A [ -4.13e-04 -7.15e-06 -2.31e-05 1.22e-02 1.43e-02 2.35e-03 -1.01e-04 -2.02e-04 -1.11e-04 -5.00e-04 -2.57e-03 ]
C [ 7.22e-06 1.23e-05 5.20e-06 -6.50e-04 -7.61e-04 -4.60e-04 -1.75e-04 9.90e-03 6.52e-02 6.01e-02 1.59e-02 ]
G [ 6.20e-02 9.61e-02 6.97e-02 2.51e-02 7.78e-04 -3.23e-04 -1.20e-04 -4.49e-04 -7.09e-05 -1.95e-05 1.24e-03 ]
T [ -6.31e-04 9.35e-06 1.47e-03 -7.06e-04 1.25e-03 4.52e-02 6.77e-02 3.39e-02 8.48e-04 -5.02e-04 -3.24e-03 ]

Frequency matrix

A [ 421 9 149 4234 4859 1467 159 419 432 876 3458 ]
C [ 331 15 55 691 2973 697 340 3307 9655 9074 4456 ]
G [ 10121 11672 10315 5913 1845 703 585 456 219 521 1846 ]
T [ 938 115 1292 973 2134 8944 10727 7629 1505 1340 2052 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000234.1 RELA ENCSR000EBD GM18951 Homo sapiens
BP000324.1 RELA ENCSR000EAI GM12891 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000485.1 RELA ENCSR580HOI HepG2 Homo sapiens
BP000574.1 RELA ENCSR000EAQ GM15510 Homo sapiens
BP000725.1 RELA ENCSR000EAN GM12892 Homo sapiens
BP000749.1 RELA ENCSR664POU GM12878 Homo sapiens
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