Detailed information of deep learning profile BP000338.1

This page shows detailed deep learning-derived predictions and motifs for RELA in GM19193 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: RELA
Model ID: BP000338.1
Cell line/tissue: GM19193
Class: Rel homology region (RHR) factors
Family: NF-kappaB-related factors
Best Match(es): MA0107.1
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q04206  
Source: ENCSR000EBM
Model: BPNet

Contribution weight matrix (CWM)

A [ -3.24e-03 -5.02e-04 8.48e-04 3.39e-02 6.77e-02 4.52e-02 1.25e-03 -7.06e-04 1.47e-03 9.35e-06 -6.31e-04 ]
C [ 1.24e-03 -1.95e-05 -7.09e-05 -4.49e-04 -1.20e-04 -3.23e-04 7.78e-04 2.51e-02 6.97e-02 9.61e-02 6.20e-02 ]
G [ 1.59e-02 6.01e-02 6.52e-02 9.90e-03 -1.75e-04 -4.60e-04 -7.61e-04 -6.50e-04 5.20e-06 1.23e-05 7.22e-06 ]
T [ -2.57e-03 -5.00e-04 -1.11e-04 -2.02e-04 -1.01e-04 2.35e-03 1.43e-02 1.22e-02 -2.31e-05 -7.15e-06 -4.13e-04 ]

Frequency matrix

A [ 2052 1340 1505 7629 10727 8944 2134 973 1292 115 938 ]
C [ 1846 521 219 456 585 703 1845 5913 10315 11672 10121 ]
G [ 4456 9074 9655 3307 340 697 2973 691 55 15 331 ]
T [ 3458 876 432 419 159 1467 4859 4234 149 9 421 ]

7 profiles found for the same TF (RELA) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000234.1 RELA ENCSR000EBD GM18951 Homo sapiens
BP000324.1 RELA ENCSR000EAI GM12891 Homo sapiens
BP000357.1 RELA ENCSR000EAG GM12878 Homo sapiens
BP000485.1 RELA ENCSR580HOI HepG2 Homo sapiens
BP000574.1 RELA ENCSR000EAQ GM15510 Homo sapiens
BP000725.1 RELA ENCSR000EAN GM12892 Homo sapiens
BP000749.1 RELA ENCSR664POU GM12878 Homo sapiens
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