This page shows detailed deep learning-derived predictions and motifs for CTCF in upper lobe of right lung using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000340.1 |
| Cell line/tissue: | upper lobe of right lung |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR164ASX |
| Model: | BPNet |
| A [ | -1.13e-03 | -3.61e-03 | -3.07e-03 | -4.33e-04 | -5.56e-04 | 4.55e-03 | -6.32e-04 | -3.50e-04 | -2.50e-03 | 1.90e-02 | -2.33e-03 | -6.80e-03 | -6.99e-04 | -3.15e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.07e-02 | 5.69e-02 | -1.18e-03 | 1.13e-01 | 1.75e-01 | 5.54e-02 | 7.57e-02 | 1.84e-01 | 5.68e-04 | -2.78e-03 | 1.21e-02 | 6.72e-03 | -3.98e-04 | -2.33e-03 | ] |
| G [ | 3.18e-02 | -1.00e-03 | 9.30e-02 | -5.28e-04 | -4.77e-05 | -1.83e-04 | -2.19e-04 | -1.01e-04 | -3.22e-04 | 1.84e-02 | 5.65e-02 | -2.13e-04 | 1.82e-01 | 8.95e-02 | ] |
| T [ | -3.16e-03 | 1.00e-02 | -3.54e-03 | -1.37e-03 | -7.34e-04 | -5.22e-03 | 1.68e-02 | -4.08e-04 | 8.22e-02 | -5.49e-03 | -2.03e-03 | 2.50e-02 | -9.40e-04 | -1.64e-03 | ] |
| A [ | 4094 | 2112 | 3354 | 3067 | 282 | 14502 | 393 | 134 | 2605 | 14401 | 1479 | 6129 | 4 | 2841 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12893 | 21259 | 1173 | 37075 | 41120 | 22649 | 25150 | 41484 | 3556 | 3900 | 15303 | 5817 | 9 | 3044 | ] |
| G [ | 20845 | 1986 | 31625 | 1075 | 136 | 1947 | 452 | 82 | 1473 | 17148 | 22529 | 2240 | 41947 | 31934 | ] |
| T [ | 4151 | 16626 | 5831 | 767 | 445 | 2885 | 15988 | 283 | 34349 | 6534 | 2673 | 27797 | 23 | 4163 | ] |
