Detailed information of deep learning profile BP000343.1

This page shows detailed deep learning-derived predictions and motifs for REST in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000343.1
Cell line/tissue: A549
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR892DRK
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.36e-03 7.92e-04 1.68e-06 -1.72e-04 -6.72e-04 -1.78e-05 -1.37e-06 7.34e-02 -5.15e-05 7.84e-02 1.32e-05 -6.00e-04 5.18e-04 4.57e-05 -2.86e-04 ]
C [ 4.54e-03 1.08e-02 4.73e-03 1.12e-02 9.30e-04 1.71e-05 0.00e+00 9.23e-05 5.69e-02 1.14e-04 0.00e+00 4.67e-02 -1.72e-04 3.05e-02 3.40e-02 ]
G [ 3.66e-03 -4.40e-04 1.19e-02 -1.56e-04 -4.88e-04 8.85e-02 9.91e-02 -5.67e-05 -7.81e-05 1.88e-06 9.63e-02 -3.09e-04 1.23e-02 5.89e-04 -6.18e-05 ]
T [ -1.50e-03 3.88e-04 -5.87e-04 2.11e-03 3.08e-02 0.00e+00 1.96e-05 6.96e-05 -1.14e-05 6.51e-06 2.32e-06 7.36e-04 8.55e-03 -5.46e-04 3.51e-05 ]

Frequency matrix

A [ 2376 663 715 1300 544 72 92 4122 168 4353 67 388 1126 641 484 ]
C [ 737 2492 2194 1202 612 17 3 159 3591 15 3 3149 89 2666 3042 ]
G [ 853 578 935 742 411 4309 4288 23 497 7 4326 264 1489 810 135 ]
T [ 438 671 560 1160 2837 6 21 100 148 29 8 603 1700 287 743 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages