Detailed information of deep learning profile BP000343.1

This page shows detailed deep learning-derived predictions and motifs for REST in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000343.1
Cell line/tissue: A549
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR892DRK
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.51e-05 -5.46e-04 8.55e-03 7.36e-04 2.32e-06 6.51e-06 -1.14e-05 6.96e-05 1.96e-05 0.00e+00 3.08e-02 2.11e-03 -5.87e-04 3.88e-04 -1.50e-03 ]
C [ -6.18e-05 5.89e-04 1.23e-02 -3.09e-04 9.63e-02 1.88e-06 -7.81e-05 -5.67e-05 9.91e-02 8.85e-02 -4.88e-04 -1.56e-04 1.19e-02 -4.40e-04 3.66e-03 ]
G [ 3.40e-02 3.05e-02 -1.72e-04 4.67e-02 0.00e+00 1.14e-04 5.69e-02 9.23e-05 0.00e+00 1.71e-05 9.30e-04 1.12e-02 4.73e-03 1.08e-02 4.54e-03 ]
T [ -2.86e-04 4.57e-05 5.18e-04 -6.00e-04 1.32e-05 7.84e-02 -5.15e-05 7.34e-02 -1.37e-06 -1.78e-05 -6.72e-04 -1.72e-04 1.68e-06 7.92e-04 7.36e-03 ]

Frequency matrix

A [ 743 287 1700 603 8 29 148 100 21 6 2837 1160 560 671 438 ]
C [ 135 810 1489 264 4326 7 497 23 4288 4309 411 742 935 578 853 ]
G [ 3042 2666 89 3149 3 15 3591 159 3 17 612 1202 2194 2492 737 ]
T [ 484 641 1126 388 67 4353 168 4122 92 72 544 1300 715 663 2376 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages