Detailed information of deep learning profile BP000345.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000345.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR385RUW
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.15e-03 -7.37e-04 2.29e-03 4.01e-02 8.01e-06 1.91e-02 -1.13e-03 2.86e-03 5.29e-03 -9.95e-04 0.00e+00 -4.40e-05 2.29e-03 -4.91e-06 -1.30e-03 ]
C [ -1.35e-04 -2.56e-04 -1.38e-03 -5.99e-04 6.81e-02 -1.14e-03 1.07e-03 -9.29e-04 -9.53e-05 1.59e-03 0.00e+00 -9.53e-06 -8.77e-04 5.25e-02 4.63e-03 ]
G [ 4.72e-03 3.14e-02 -9.81e-04 -5.14e-04 -3.47e-07 1.33e-03 2.06e-03 -8.59e-04 1.24e-03 -4.32e-04 7.59e-02 -1.14e-05 -1.16e-03 -2.55e-07 -7.41e-05 ]
T [ -1.86e-03 -5.29e-04 1.73e-03 -6.51e-04 -9.54e-06 -2.24e-03 1.46e-03 1.58e-03 -7.53e-04 2.59e-02 -3.40e-06 5.31e-02 5.21e-03 -3.63e-06 7.64e-03 ]

Frequency matrix

A [ 7040 3504 5847 12096 1 11038 3242 5060 5319 2603 15 533 4222 447 3119 ]
C [ 1273 696 2905 1135 17040 1118 4136 3229 4507 973 1 139 3358 16076 5559 ]
G [ 5422 9579 3928 1406 0 1077 5127 3396 4204 419 17028 71 2216 28 332 ]
T [ 3310 3266 4365 2408 4 3813 4540 5360 3015 13050 1 16302 7249 494 8035 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000789.1 NR3C1 ENCSR000BHE A549 Homo sapiens
BP000837.1 NR3C1 ENCSR287FWE A549 Homo sapiens
BP000919.1 NR3C1 ENCSR908AOO A549 Homo sapiens
BP000983.1 NR3C1 ENCSR000BJC Ishikawa Homo sapiens
BP001035.1 NR3C1 ENCSR773NQB A549 Homo sapiens
BP001127.1 NR3C1 ENCSR660RYY A549 Homo sapiens
BP001151.1 NR3C1 ENCSR919OXR A549 Homo sapiens
BP001200.1 NR3C1 ENCSR458VTP A549 Homo sapiens
Showing 8 profiles of page 2 from 2 pages