Detailed information of deep learning profile BP000345.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000345.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR385RUW
Model: BPNet

Contribution weight matrix (CWM)

A [ 7.64e-03 -3.63e-06 5.21e-03 5.31e-02 -3.40e-06 2.59e-02 -7.53e-04 1.58e-03 1.46e-03 -2.24e-03 -9.54e-06 -6.51e-04 1.73e-03 -5.29e-04 -1.86e-03 ]
C [ -7.41e-05 -2.55e-07 -1.16e-03 -1.14e-05 7.59e-02 -4.32e-04 1.24e-03 -8.59e-04 2.06e-03 1.33e-03 -3.47e-07 -5.14e-04 -9.81e-04 3.14e-02 4.72e-03 ]
G [ 4.63e-03 5.25e-02 -8.77e-04 -9.53e-06 0.00e+00 1.59e-03 -9.53e-05 -9.29e-04 1.07e-03 -1.14e-03 6.81e-02 -5.99e-04 -1.38e-03 -2.56e-04 -1.35e-04 ]
T [ -1.30e-03 -4.91e-06 2.29e-03 -4.40e-05 0.00e+00 -9.95e-04 5.29e-03 2.86e-03 -1.13e-03 1.91e-02 8.01e-06 4.01e-02 2.29e-03 -7.37e-04 5.15e-03 ]

Frequency matrix

A [ 8035 494 7249 16302 1 13050 3015 5360 4540 3813 4 2408 4365 3266 3310 ]
C [ 332 28 2216 71 17028 419 4204 3396 5127 1077 0 1406 3928 9579 5422 ]
G [ 5559 16076 3358 139 1 973 4507 3229 4136 1118 17040 1135 2905 696 1273 ]
T [ 3119 447 4222 533 15 2603 5319 5060 3242 11038 1 12096 5847 3504 7040 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages