Detailed information of deep learning profile BP000345.1

This page shows detailed deep learning-derived predictions and motifs for NR3C1 in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: NR3C1
Model ID: BP000345.1
Cell line/tissue: A549
Class: Nuclear receptors with C4 zinc fingers
Family: Steroid hormone receptors (NR3)
Best Match(es): MA0113.4
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P04150  
Source: ENCSR385RUW
Model: BPNet

Contribution weight matrix (CWM)

A [ 5.15e-03 -7.37e-04 2.29e-03 4.01e-02 8.01e-06 1.91e-02 -1.13e-03 2.86e-03 5.29e-03 -9.95e-04 0.00e+00 -4.40e-05 2.29e-03 -4.91e-06 -1.30e-03 ]
C [ -1.35e-04 -2.56e-04 -1.38e-03 -5.99e-04 6.81e-02 -1.14e-03 1.07e-03 -9.29e-04 -9.53e-05 1.59e-03 0.00e+00 -9.53e-06 -8.77e-04 5.25e-02 4.63e-03 ]
G [ 4.72e-03 3.14e-02 -9.81e-04 -5.14e-04 -3.47e-07 1.33e-03 2.06e-03 -8.59e-04 1.24e-03 -4.32e-04 7.59e-02 -1.14e-05 -1.16e-03 -2.55e-07 -7.41e-05 ]
T [ -1.86e-03 -5.29e-04 1.73e-03 -6.51e-04 -9.54e-06 -2.24e-03 1.46e-03 1.58e-03 -7.53e-04 2.59e-02 -3.40e-06 5.31e-02 5.21e-03 -3.63e-06 7.64e-03 ]

Frequency matrix

A [ 7040 3504 5847 12096 1 11038 3242 5060 5319 2603 15 533 4222 447 3119 ]
C [ 1273 696 2905 1135 17040 1118 4136 3229 4507 973 1 139 3358 16076 5559 ]
G [ 5422 9579 3928 1406 0 1077 5127 3396 4204 419 17028 71 2216 28 332 ]
T [ 3310 3266 4365 2408 4 3813 4540 5360 3015 13050 1 16302 7249 494 8035 ]

Alternative motif patterns (AMPs)

18 profiles found for the same TF (NR3C1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000215.1 NR3C1 ENCSR952GOL A549 Homo sapiens
BP000278.1 NR3C1 ENCSR471EKW A549 Homo sapiens
BP000289.1 NR3C1 ENCSR000BHG A549 Homo sapiens
BP000310.1 NR3C1 ENCSR255CTA A549 Homo sapiens
BP000332.1 NR3C1 ENCSR720DXT A549 Homo sapiens
BP000513.1 NR3C1 ENCSR070VXO A549 Homo sapiens
BP000581.1 NR3C1 ENCSR691GRA A549 Homo sapiens
BP000659.1 NR3C1 ENCSR424JOE A549 Homo sapiens
BP000734.1 NR3C1 ENCSR686PFM A549 Homo sapiens
BP000782.1 NR3C1 ENCSR857QEA A549 Homo sapiens
Showing 10 profiles of page 1 from 2 pages