This page shows detailed deep learning-derived predictions and motifs for CTCF in HL-60 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000349.1 |
| Cell line/tissue: | HL-60 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DUP |
| Model: | BPNet |
| A [ | -2.70e-03 | -8.05e-04 | 3.44e-02 | -1.72e-03 | -6.22e-03 | 9.71e-02 | -4.51e-04 | 2.03e-02 | -4.17e-03 | -1.10e-03 | -1.77e-03 | -4.58e-03 | 7.28e-03 | -4.41e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.16e-01 | 2.24e-01 | -2.74e-04 | 7.85e-02 | 1.62e-02 | -3.55e-04 | -1.11e-04 | -8.70e-05 | -3.53e-04 | -5.71e-05 | 8.57e-04 | 1.25e-01 | -8.36e-05 | 4.37e-02 | ] |
| G [ | -1.66e-03 | -2.87e-04 | 8.03e-03 | 1.50e-02 | -2.33e-03 | 8.28e-04 | 2.23e-01 | 9.38e-02 | 7.07e-02 | 2.11e-01 | 1.38e-01 | -2.85e-04 | 7.55e-02 | 1.42e-02 | ] |
| T [ | -3.84e-03 | -7.36e-04 | -6.78e-03 | -2.17e-03 | 2.52e-02 | -2.49e-03 | -3.42e-04 | -5.05e-04 | 2.67e-03 | -7.09e-04 | -1.57e-03 | -3.97e-03 | -3.57e-03 | -1.46e-03 | ] |
| A [ | 2663 | 529 | 20689 | 1673 | 4430 | 25378 | 213 | 11499 | 1588 | 369 | 962 | 4159 | 11901 | 2881 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 23634 | 28917 | 1299 | 17530 | 11927 | 768 | 54 | 164 | 932 | 117 | 1266 | 22173 | 1522 | 15327 | ] |
| G [ | 1698 | 186 | 4025 | 9829 | 2184 | 2114 | 29452 | 17882 | 17048 | 29068 | 25283 | 1001 | 15033 | 8785 | ] |
| T [ | 1846 | 209 | 3828 | 809 | 11300 | 1581 | 122 | 296 | 10273 | 287 | 2330 | 2508 | 1384 | 2848 | ] |