This page shows detailed deep learning-derived predictions and motifs for CTCF in pancreas using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000350.1 |
| Cell line/tissue: | pancreas |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR852BLA |
| Model: | BPNet |
| A [ | -1.11e-03 | -2.14e-03 | -2.52e-03 | -5.44e-04 | -3.19e-04 | 4.42e-03 | -2.52e-04 | -1.69e-04 | -1.39e-03 | 1.58e-02 | -1.18e-03 | -3.41e-03 | -3.90e-04 | -2.00e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.72e-03 | 4.37e-02 | -3.17e-04 | 8.45e-02 | 1.27e-01 | 3.89e-02 | 5.32e-02 | 1.32e-01 | 5.66e-05 | -1.90e-03 | 7.47e-03 | 5.65e-03 | -1.45e-04 | -1.24e-03 | ] |
| G [ | 2.44e-02 | -4.96e-04 | 7.28e-02 | 7.27e-05 | -4.41e-05 | -1.75e-04 | -1.42e-05 | -2.42e-05 | -2.33e-04 | 1.26e-02 | 4.98e-02 | -4.87e-04 | 1.32e-01 | 7.09e-02 | ] |
| T [ | -2.30e-03 | 8.34e-03 | -1.66e-03 | -8.22e-04 | -5.31e-04 | -2.15e-03 | 1.48e-02 | -2.77e-04 | 6.41e-02 | -4.15e-03 | -1.12e-03 | 2.27e-02 | -4.59e-04 | -1.48e-03 | ] |
| A [ | 1888 | 928 | 1711 | 1736 | 43 | 8884 | 129 | 30 | 953 | 8889 | 586 | 2536 | 108 | 1438 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7455 | 11843 | 481 | 20929 | 23428 | 13101 | 13469 | 23494 | 1357 | 1715 | 7672 | 3419 | 109 | 1288 | ] |
| G [ | 12041 | 770 | 18617 | 489 | 13 | 703 | 86 | 12 | 568 | 9535 | 14250 | 765 | 23084 | 18770 | ] |
| T [ | 2215 | 10058 | 2791 | 445 | 115 | 911 | 9915 | 63 | 20721 | 3460 | 1091 | 16879 | 298 | 2103 | ] |
