This page shows detailed deep learning-derived predictions and motifs for CTCF in HCT116 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000354.1 |
| Cell line/tissue: | HCT116 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR288YJL |
| Model: | BPNet |
| A [ | -2.75e-03 | -2.76e-03 | -7.91e-04 | -1.19e-03 | 1.31e-03 | -7.95e-04 | -2.97e-04 | -1.95e-03 | 2.39e-02 | -2.00e-03 | -5.95e-03 | -6.69e-04 | -2.11e-03 | -4.64e-03 | -1.90e-03 | 8.71e-03 | 9.81e-04 | 3.89e-03 | 1.36e-03 | -7.46e-04 | -1.27e-03 | 4.98e-04 | -3.96e-04 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 3.34e-02 | 2.10e-04 | 7.32e-02 | 1.30e-01 | 5.67e-02 | 9.05e-02 | 1.79e-01 | 1.43e-03 | -1.57e-03 | 1.22e-02 | 4.19e-03 | -3.60e-04 | -1.79e-03 | 1.49e-02 | 1.05e-02 | -2.05e-03 | 3.89e-04 | -5.30e-04 | -1.54e-05 | -8.49e-04 | -7.23e-04 | -1.60e-03 | -3.08e-03 | ] |
| G [ | 1.46e-03 | 5.27e-02 | 1.64e-03 | -2.78e-04 | -4.07e-04 | -2.32e-04 | -2.94e-05 | -4.22e-04 | 1.53e-02 | 6.08e-02 | 2.34e-04 | 1.80e-01 | 1.11e-01 | -2.59e-03 | 6.60e-03 | 1.54e-02 | 3.91e-03 | -8.18e-04 | 3.16e-04 | 3.44e-03 | 6.06e-03 | 1.25e-02 | 2.84e-02 | ] |
| T [ | 3.93e-03 | -1.21e-03 | -2.04e-03 | -1.55e-03 | -4.87e-03 | 6.23e-03 | -3.19e-04 | 7.90e-02 | -3.33e-03 | -1.12e-03 | 2.82e-02 | -1.01e-03 | -1.39e-03 | 7.65e-03 | -5.27e-03 | -4.85e-03 | -1.48e-03 | 3.29e-04 | 2.91e-04 | 6.55e-04 | -4.38e-04 | -1.96e-03 | -2.09e-03 | ] |
| A [ | 4575 | 4570 | 5042 | 1572 | 11407 | 380 | 2 | 2002 | 15950 | 667 | 6195 | 1 | 727 | 6870 | 8320 | 15198 | 9876 | 12023 | 10060 | 8482 | 8317 | 9804 | 8868 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12862 | 2940 | 24731 | 33363 | 20713 | 28927 | 37073 | 2530 | 1766 | 10293 | 3045 | 2 | 599 | 15143 | 12602 | 4139 | 8871 | 6994 | 7742 | 8446 | 7765 | 5753 | 4966 | ] |
| G [ | 5530 | 22543 | 3879 | 1063 | 1418 | 114 | 1 | 682 | 14076 | 24768 | 977 | 37058 | 34036 | 3715 | 8791 | 13179 | 10283 | 8383 | 9589 | 10301 | 11675 | 13778 | 16830 | ] |
| T [ | 14111 | 7025 | 3426 | 1081 | 3540 | 7657 | 2 | 31864 | 5286 | 1350 | 26861 | 17 | 1715 | 11350 | 7365 | 4562 | 8047 | 9678 | 9688 | 9849 | 9322 | 7744 | 6414 | ] |
