Detailed information of deep learning profile BP000358.1

This page shows detailed deep learning-derived predictions and motifs for PKNOX1 in HEK293T using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: PKNOX1
Model ID: BP000358.1
Cell line/tissue: HEK293T
Class: Homeo domain factors
Family: TALE-type homeo domain factors
Best Match(es): MA0782.2 MA0782.3
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P55347  
Source: ENCSR233FAG
Model: BPNet

Contribution weight matrix (CWM)

A [ -1.11e-05 0.00e+00 1.91e-02 0.00e+00 1.63e-02 -3.97e-05 1.27e-03 -5.76e-04 ]
C [ -1.70e-06 0.00e+00 -4.43e-06 3.64e-02 2.44e-06 -3.80e-06 2.36e-03 3.77e-03 ]
G [ -2.01e-05 3.77e-02 1.74e-05 -6.57e-06 9.17e-05 1.41e-02 2.64e-03 5.21e-05 ]
T [ 2.20e-02 1.09e-04 7.13e-05 7.31e-04 6.44e-04 3.29e-04 5.99e-05 3.80e-03 ]

Frequency matrix

A [ 6008 38 76194 28 86078 9582 25201 21848 ]
C [ 2283 7 4838 103060 1687 11792 26045 23624 ]
G [ 1412 103022 9562 10 5786 58527 25894 18146 ]
T [ 93456 92 12565 61 9608 23257 26020 39541 ]

3 profiles found for the same TF (PKNOX1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000244.1 PKNOX1 ENCSR115SMW K562 Homo sapiens
BP000351.1 PKNOX1 ENCSR711XNY GM12878 Homo sapiens
BP001149.1 PKNOX1 ENCSR986XYK MCF-7 Homo sapiens
Showing 3 profiles of page 1 from 1 pages
  • 1 (current)