This page shows detailed deep learning-derived predictions and motifs for CTCF in MCF-7 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000364.1 |
| Cell line/tissue: | MCF-7 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DMO |
| Model: | BPNet |
| A [ | -2.14e-03 | -5.64e-03 | -4.21e-03 | -1.66e-03 | -1.06e-03 | 2.72e-03 | -1.02e-03 | -5.16e-04 | -3.42e-03 | 1.06e-02 | -2.57e-03 | -9.37e-03 | -2.71e-04 | -3.60e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.54e-02 | 5.95e-02 | 5.66e-04 | 1.11e-01 | 1.72e-01 | 5.60e-02 | 8.28e-02 | 1.84e-01 | 3.46e-03 | 2.37e-04 | 2.04e-02 | 5.56e-03 | 6.63e-05 | -2.84e-04 | ] |
| G [ | 3.70e-02 | 1.83e-03 | 9.59e-02 | 3.39e-03 | 1.65e-04 | 4.44e-04 | -4.15e-05 | 4.34e-05 | 2.44e-04 | 2.06e-02 | 5.94e-02 | 6.82e-04 | 1.85e-01 | 9.89e-02 | ] |
| T [ | -5.05e-03 | 3.17e-03 | -7.34e-03 | -2.61e-03 | -1.41e-03 | -7.17e-03 | 7.69e-03 | -6.99e-04 | 4.72e-02 | -5.78e-03 | -2.27e-03 | 1.69e-02 | -5.97e-04 | -3.08e-03 | ] |
| A [ | 8813 | 5478 | 6596 | 5885 | 901 | 23279 | 1514 | 528 | 8112 | 20730 | 2547 | 14057 | 5 | 4256 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 22055 | 34131 | 3876 | 57372 | 69401 | 37807 | 47537 | 70307 | 9486 | 8851 | 28345 | 10214 | 3 | 5418 | ] |
| G [ | 33188 | 7111 | 49267 | 5596 | 418 | 3995 | 1346 | 259 | 3310 | 30780 | 36591 | 4223 | 71674 | 56022 | ] |
| T [ | 7641 | 24977 | 11958 | 2844 | 977 | 6616 | 21301 | 603 | 50789 | 11337 | 4213 | 43203 | 15 | 6000 | ] |
