This page shows detailed deep learning-derived predictions and motifs for CTCF in A549 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000374.1 |
| Cell line/tissue: | A549 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR553UWG |
| Model: | BPNet |
| A [ | -1.72e-03 | -3.77e-03 | -3.26e-03 | -3.62e-04 | -5.08e-04 | 6.68e-03 | -5.40e-04 | -2.56e-04 | -2.17e-03 | 1.89e-02 | -1.93e-03 | -5.89e-03 | -7.66e-04 | -3.00e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.07e-02 | 5.65e-02 | -5.73e-04 | 1.09e-01 | 1.65e-01 | 5.44e-02 | 6.88e-02 | 1.70e-01 | 5.43e-04 | -2.32e-03 | 1.12e-02 | 5.20e-03 | -4.90e-04 | -1.99e-03 | ] |
| G [ | 3.56e-02 | -2.49e-04 | 9.55e-02 | 3.83e-04 | -3.90e-05 | -4.24e-04 | -1.98e-04 | -1.25e-04 | -3.54e-04 | 1.29e-02 | 5.31e-02 | -5.09e-05 | 1.59e-01 | 8.14e-02 | ] |
| T [ | -2.78e-03 | 9.72e-03 | -3.90e-03 | -1.41e-03 | -7.68e-04 | -4.19e-03 | 1.67e-02 | -4.44e-04 | 7.12e-02 | -4.30e-03 | -2.14e-03 | 2.31e-02 | -1.15e-03 | -1.82e-03 | ] |
| A [ | 3787 | 1945 | 3116 | 3051 | 218 | 14668 | 295 | 91 | 2083 | 14506 | 1196 | 5379 | 179 | 2690 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 12350 | 18435 | 973 | 34641 | 38587 | 21327 | 22902 | 38925 | 2628 | 3049 | 13801 | 5043 | 120 | 2374 | ] |
| G [ | 19220 | 1735 | 29855 | 838 | 58 | 1084 | 182 | 38 | 871 | 15599 | 21852 | 1583 | 38417 | 30314 | ] |
| T [ | 3890 | 17132 | 5303 | 718 | 385 | 2169 | 15869 | 194 | 33667 | 6094 | 2398 | 27243 | 532 | 3871 | ] |
