This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus muscularis mucosa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000375.1 |
| Cell line/tissue: | esophagus muscularis mucosa |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR353DFU |
| Model: | BPNet |
| A [ | -8.73e-04 | -2.43e-03 | -2.53e-03 | -1.96e-04 | -3.79e-04 | 6.00e-03 | -3.17e-04 | -2.39e-04 | -1.67e-03 | 1.60e-02 | -1.59e-03 | -4.32e-03 | -4.06e-04 | -2.54e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.29e-02 | 4.80e-02 | -4.14e-04 | 9.90e-02 | 1.48e-01 | 4.48e-02 | 5.79e-02 | 1.60e-01 | 2.49e-04 | -1.77e-03 | 1.16e-02 | 6.06e-03 | -1.90e-04 | -1.38e-03 | ] |
| G [ | 2.66e-02 | -5.25e-04 | 8.21e-02 | -7.69e-05 | -3.39e-05 | -1.92e-06 | 4.69e-05 | -3.02e-05 | -1.03e-04 | 1.62e-02 | 5.93e-02 | -6.71e-04 | 1.57e-01 | 8.09e-02 | ] |
| T [ | -2.68e-03 | 9.58e-03 | -2.78e-03 | -1.07e-03 | -5.76e-04 | -2.61e-03 | 1.71e-02 | -3.15e-04 | 6.86e-02 | -4.92e-03 | -1.42e-03 | 2.63e-02 | -3.11e-04 | -1.37e-03 | ] |
| A [ | 3067 | 1632 | 2615 | 2519 | 244 | 11102 | 345 | 27 | 1847 | 10899 | 905 | 4147 | 1 | 1890 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 10299 | 15878 | 1059 | 27455 | 31295 | 17435 | 18776 | 31945 | 2276 | 2789 | 11012 | 4921 | 3 | 1986 | ] |
| G [ | 15499 | 1633 | 23817 | 1221 | 92 | 1485 | 383 | 5 | 1065 | 13377 | 18473 | 1255 | 32022 | 25314 | ] |
| T [ | 3161 | 12883 | 4535 | 831 | 395 | 2003 | 12522 | 49 | 26839 | 4961 | 1636 | 21702 | 0 | 2836 | ] |
