This page shows detailed deep learning-derived predictions and motifs for CTCF in brain using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000376.1 |
| Cell line/tissue: | brain |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR467EQP |
| Model: | BPNet |
| A [ | -1.12e-03 | -5.52e-04 | 2.26e-02 | -1.58e-03 | -4.20e-03 | 6.55e-02 | -2.57e-04 | 2.01e-02 | -2.88e-03 | -5.87e-04 | -1.14e-03 | -2.31e-03 | 9.89e-03 | -2.23e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 7.11e-02 | 1.49e-01 | -7.18e-04 | 4.96e-02 | 1.28e-02 | -1.54e-04 | -3.32e-05 | -8.94e-05 | -1.48e-04 | -7.93e-05 | 3.15e-05 | 7.63e-02 | -3.79e-04 | 2.68e-02 | ] |
| G [ | -1.49e-03 | -2.58e-04 | 4.82e-03 | 9.50e-03 | -1.90e-03 | 1.93e-04 | 1.46e-01 | 5.69e-02 | 4.55e-02 | 1.44e-01 | 9.61e-02 | -7.42e-04 | 4.54e-02 | 1.13e-02 | ] |
| T [ | -2.37e-03 | -5.33e-04 | -3.80e-03 | -1.59e-03 | 1.60e-02 | -1.85e-03 | -1.64e-04 | -4.05e-04 | 7.29e-03 | -3.80e-04 | -7.13e-05 | -2.59e-03 | -2.73e-03 | -1.33e-03 | ] |
| A [ | 3335 | 210 | 25943 | 1862 | 5984 | 30746 | 342 | 15272 | 2019 | 467 | 929 | 5782 | 15058 | 3870 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 29567 | 36648 | 1414 | 21820 | 14802 | 1179 | 66 | 389 | 1289 | 99 | 1505 | 26324 | 1989 | 18070 | ] |
| G [ | 1837 | 53 | 4775 | 12308 | 2782 | 2900 | 36353 | 20959 | 19999 | 36125 | 31399 | 1400 | 17983 | 11219 | ] |
| T [ | 2233 | 60 | 4838 | 981 | 13403 | 2146 | 210 | 351 | 13663 | 280 | 3137 | 3464 | 1940 | 3811 | ] |