Detailed information of deep learning profile BP000381.1

This page shows detailed deep learning-derived predictions and motifs for USF1 in SK-N-SH using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: USF1
Model ID: BP000381.1
Cell line/tissue: SK-N-SH
Class: Basic helix-loop-helix factors (bHLH)
Family: bHLH-ZIP
Best Match(es): MA0093.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: P22415  
Source: ENCSR000BTZ
Model: BPNet

Contribution weight matrix (CWM)

A [ 3.56e-03 -1.69e-03 -1.49e-05 7.56e-02 -1.19e-05 1.94e-03 -1.91e-05 -3.21e-07 4.37e-02 -2.53e-04 ]
C [ -4.85e-04 4.91e-03 1.19e-01 -2.01e-04 6.26e-02 6.91e-04 1.27e-05 3.47e-05 -6.04e-04 3.87e-02 ]
G [ 1.31e-02 -1.56e-03 6.21e-06 1.57e-04 6.82e-04 7.88e-02 -6.49e-06 1.25e-01 4.61e-04 -3.46e-04 ]
T [ -2.01e-03 1.08e-02 -4.77e-06 -2.78e-04 5.85e-03 -5.59e-06 9.35e-02 -4.57e-06 -6.48e-04 2.46e-03 ]

Frequency matrix

A [ 6207 2200 103 21501 107 3970 135 0 13527 1031 ]
C [ 4022 7610 23150 498 15859 1504 227 23 2665 13854 ]
G [ 11208 3558 35 659 1566 17768 135 23238 5594 2997 ]
T [ 1862 9931 11 641 5768 57 22802 38 1513 5417 ]

13 profiles found for the same TF (USF1) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP001031.1 USF1 ENCSR787CHF K562 Homo sapiens
BP001122.1 USF1 ENCSR248QBT WTC11 Homo sapiens
BP001205.1 USF1 ENCSR000BKT K562 Homo sapiens
Showing 3 profiles of page 2 from 2 pages