Detailed information of deep learning profile BP000383.1

This page shows detailed deep learning-derived predictions and motifs for REST in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000383.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR867WPH
Model: BPNet

Contribution weight matrix (CWM)

A [ 9.54e-04 -2.39e-04 -5.83e-05 -2.91e-06 8.28e-07 5.23e-02 1.34e-04 4.40e-02 2.05e-05 -3.22e-04 2.65e-03 1.19e-03 ]
C [ 2.39e-03 1.60e-02 8.96e-04 1.57e-05 7.77e-05 2.93e-04 4.06e-02 4.05e-05 -5.29e-06 3.40e-02 -4.12e-04 1.16e-02 ]
G [ 1.17e-02 6.11e-04 -3.54e-05 7.56e-02 7.42e-02 2.21e-05 -2.07e-04 1.53e-04 6.42e-02 -7.29e-05 4.04e-03 1.76e-03 ]
T [ 3.17e-04 1.62e-03 2.89e-02 9.05e-06 1.65e-04 -5.64e-05 -2.55e-05 1.30e-05 2.00e-05 6.85e-04 3.61e-03 -8.52e-04 ]

Frequency matrix

A [ 3670 2129 2323 23 76 11783 1937 12172 322 1671 4861 3292 ]
C [ 3625 5968 1734 11 16 1096 10737 335 134 8991 1492 4934 ]
G [ 3691 2538 1378 14216 14148 365 1025 198 13531 1017 3782 3830 ]
T [ 3275 3625 8825 11 21 1017 562 1556 274 2582 4126 2206 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages