Detailed information of deep learning profile BP000383.1

This page shows detailed deep learning-derived predictions and motifs for REST in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000383.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR867WPH
Model: BPNet

Contribution weight matrix (CWM)

A [ 9.54e-04 -2.39e-04 -5.83e-05 -2.91e-06 8.28e-07 5.23e-02 1.34e-04 4.40e-02 2.05e-05 -3.22e-04 2.65e-03 1.19e-03 ]
C [ 2.39e-03 1.60e-02 8.96e-04 1.57e-05 7.77e-05 2.93e-04 4.06e-02 4.05e-05 -5.29e-06 3.40e-02 -4.12e-04 1.16e-02 ]
G [ 1.17e-02 6.11e-04 -3.54e-05 7.56e-02 7.42e-02 2.21e-05 -2.07e-04 1.53e-04 6.42e-02 -7.29e-05 4.04e-03 1.76e-03 ]
T [ 3.17e-04 1.62e-03 2.89e-02 9.05e-06 1.65e-04 -5.64e-05 -2.55e-05 1.30e-05 2.00e-05 6.85e-04 3.61e-03 -8.52e-04 ]

Frequency matrix

A [ 3670 2129 2323 23 76 11783 1937 12172 322 1671 4861 3292 ]
C [ 3625 5968 1734 11 16 1096 10737 335 134 8991 1492 4934 ]
G [ 3691 2538 1378 14216 14148 365 1025 198 13531 1017 3782 3830 ]
T [ 3275 3625 8825 11 21 1017 562 1556 274 2582 4126 2206 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000032.1 REST ENCSR000BSP MCF-7 Homo sapiens
BP000035.1 REST ENCSR000BTV neural cell Homo sapiens
BP000036.1 REST ENCSR000BUP Panc1 Homo sapiens
BP000037.1 REST ENCSR000BUU Ishikawa Homo sapiens
BP000038.1 REST ENCSR000BVI HCT116 Homo sapiens
BP000063.1 REST ENCSR054JMQ K562 Homo sapiens
BP000075.1 REST ENCSR137ZMQ K562 Homo sapiens
BP000179.1 REST ENCSR893QWP liver Homo sapiens
BP000180.1 REST ENCSR896UBV HEK293 Homo sapiens
BP000343.1 REST ENCSR892DRK A549 Homo sapiens
Showing 10 profiles of page 2 from 3 pages