Detailed information of deep learning profile BP000383.1

This page shows detailed deep learning-derived predictions and motifs for REST in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000383.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR867WPH
Model: BPNet

Contribution weight matrix (CWM)

A [ 9.54e-04 -2.39e-04 -5.83e-05 -2.91e-06 8.28e-07 5.23e-02 1.34e-04 4.40e-02 2.05e-05 -3.22e-04 2.65e-03 1.19e-03 ]
C [ 2.39e-03 1.60e-02 8.96e-04 1.57e-05 7.77e-05 2.93e-04 4.06e-02 4.05e-05 -5.29e-06 3.40e-02 -4.12e-04 1.16e-02 ]
G [ 1.17e-02 6.11e-04 -3.54e-05 7.56e-02 7.42e-02 2.21e-05 -2.07e-04 1.53e-04 6.42e-02 -7.29e-05 4.04e-03 1.76e-03 ]
T [ 3.17e-04 1.62e-03 2.89e-02 9.05e-06 1.65e-04 -5.64e-05 -2.55e-05 1.30e-05 2.00e-05 6.85e-04 3.61e-03 -8.52e-04 ]

Frequency matrix

A [ 3670 2129 2323 23 76 11783 1937 12172 322 1671 4861 3292 ]
C [ 3625 5968 1734 11 16 1096 10737 335 134 8991 1492 4934 ]
G [ 3691 2538 1378 14216 14148 365 1025 198 13531 1017 3782 3830 ]
T [ 3275 3625 8825 11 21 1017 562 1556 274 2582 4126 2206 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000442.1 REST ENCSR000BJJ SK-N-SH Homo sapiens
BP000459.1 REST ENCSR000BMN HeLa-S3 Homo sapiens
BP000564.1 REST ENCSR000BQP A549 Homo sapiens
BP000696.1 REST ENCSR000BJP PFSK-1 Homo sapiens
BP000728.1 REST ENCSR663WAR H1 Homo sapiens
BP000790.1 REST ENCSR000BTF HL-60 Homo sapiens
BP000875.1 REST ENCSR000BOZ SK-N-SH Homo sapiens
BP001141.1 REST ENCSR871KYB GM23338 Homo sapiens
Showing 8 profiles of page 3 from 3 pages