Detailed information of deep learning profile BP000383.1

This page shows detailed deep learning-derived predictions and motifs for REST in liver using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.

Model details

Name: REST
Model ID: BP000383.1
Cell line/tissue: liver
Class: C2H2 zinc finger factors
Family: Factors with multiple dispersed zinc fingers
Best Match(es): MA0138.3 MA0138.2
Taxon: Vertebrates
Species: Homo sapiens
Data Type: ChIP-seq
Uniprot ID: Q13127  
Source: ENCSR867WPH
Model: BPNet

Contribution weight matrix (CWM)

A [ -8.52e-04 3.61e-03 6.85e-04 2.00e-05 1.30e-05 -2.55e-05 -5.64e-05 1.65e-04 9.05e-06 2.89e-02 1.62e-03 3.17e-04 ]
C [ 1.76e-03 4.04e-03 -7.29e-05 6.42e-02 1.53e-04 -2.07e-04 2.21e-05 7.42e-02 7.56e-02 -3.54e-05 6.11e-04 1.17e-02 ]
G [ 1.16e-02 -4.12e-04 3.40e-02 -5.29e-06 4.05e-05 4.06e-02 2.93e-04 7.77e-05 1.57e-05 8.96e-04 1.60e-02 2.39e-03 ]
T [ 1.19e-03 2.65e-03 -3.22e-04 2.05e-05 4.40e-02 1.34e-04 5.23e-02 8.28e-07 -2.91e-06 -5.83e-05 -2.39e-04 9.54e-04 ]

Frequency matrix

A [ 2206 4126 2582 274 1556 562 1017 21 11 8825 3625 3275 ]
C [ 3830 3782 1017 13531 198 1025 365 14148 14216 1378 2538 3691 ]
G [ 4934 1492 8991 134 335 10737 1096 16 11 1734 5968 3625 ]
T [ 3292 4861 1671 322 12172 1937 11783 76 23 2323 2129 3670 ]

Alternative motif patterns (AMPs)

28 profiles found for the same TF (REST) in other cell types/tissues

Display profiles


Model ID Name Data Source Cell line/tissue Species Sequence logo
BP000001.1 REST ENCSR000ATM K562 Homo sapiens
BP000002.1 REST ENCSR000BGF GM12878 Homo sapiens
BP000004.1 REST ENCSR000BHM H1 Homo sapiens
BP000006.1 REST ENCSR000BJL HepG2 Homo sapiens
BP000007.1 REST ENCSR000BJO Panc1 Homo sapiens
BP000017.1 REST ENCSR000BMW K562 Homo sapiens
BP000024.1 REST ENCSR000BOT HepG2 Homo sapiens
BP000025.1 REST ENCSR000BOX PFSK-1 Homo sapiens
BP000027.1 REST ENCSR000BPK Panc1 Homo sapiens
BP000030.1 REST ENCSR000BQS GM12878 Homo sapiens
Showing 10 profiles of page 1 from 3 pages