This page shows detailed deep learning-derived predictions and motifs for CTCF in esophagus muscularis mucosa using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000385.1 |
| Cell line/tissue: | esophagus muscularis mucosa |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR559KAB |
| Model: | BPNet |
| A [ | -8.64e-04 | -2.08e-03 | -2.28e-03 | -3.26e-04 | -6.09e-04 | 3.36e-03 | -4.19e-04 | -2.32e-04 | -1.73e-03 | 1.83e-02 | -1.51e-03 | -4.39e-03 | -3.06e-04 | -2.16e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.03e-02 | 3.96e-02 | 1.21e-04 | 8.36e-02 | 1.34e-01 | 4.18e-02 | 5.76e-02 | 1.46e-01 | 6.61e-04 | -1.87e-03 | 1.12e-02 | 7.44e-03 | -6.59e-05 | -1.45e-03 | ] |
| G [ | 1.96e-02 | -1.26e-04 | 6.40e-02 | 3.45e-04 | -3.42e-05 | 4.23e-04 | 8.56e-05 | -1.39e-05 | -1.21e-04 | 1.41e-02 | 5.95e-02 | -5.24e-04 | 1.62e-01 | 8.95e-02 | ] |
| T [ | -2.19e-03 | 5.05e-03 | -1.59e-03 | -1.04e-03 | -6.96e-04 | -2.65e-03 | 1.34e-02 | -3.61e-04 | 6.89e-02 | -4.81e-03 | -1.24e-03 | 2.55e-02 | -3.61e-04 | -1.43e-03 | ] |
| A [ | 3183 | 2019 | 2731 | 2552 | 235 | 9873 | 404 | 6 | 1454 | 10573 | 705 | 3765 | 9 | 1509 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9807 | 14330 | 1710 | 24566 | 29542 | 16761 | 18403 | 30247 | 2023 | 2438 | 9866 | 5158 | 4 | 1550 | ] |
| G [ | 13746 | 2444 | 21167 | 1870 | 179 | 1641 | 365 | 6 | 888 | 12857 | 18284 | 1145 | 30228 | 24790 | ] |
| T [ | 3536 | 11478 | 4664 | 1284 | 316 | 1997 | 11101 | 13 | 25908 | 4404 | 1417 | 20204 | 31 | 2422 | ] |
