This page shows detailed deep learning-derived predictions and motifs for CTCF in epithelial cell of esophagus using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000386.1 |
| Cell line/tissue: | epithelial cell of esophagus |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DTR |
| Model: | BPNet |
| A [ | -2.16e-03 | -9.45e-04 | 2.22e-02 | -1.75e-03 | -4.94e-03 | 7.27e-02 | -4.98e-04 | 1.00e-02 | -5.24e-03 | -1.43e-03 | -2.14e-03 | -2.88e-03 | 6.04e-03 | -3.24e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 9.32e-02 | 1.70e-01 | -2.47e-04 | 5.59e-02 | 1.60e-02 | -2.32e-04 | -5.41e-05 | -1.22e-04 | -1.13e-04 | 9.20e-07 | 1.73e-03 | 6.80e-02 | 8.41e-04 | 2.74e-02 | ] |
| G [ | -1.49e-03 | -4.11e-04 | 6.01e-03 | 1.37e-02 | -1.70e-03 | 1.07e-03 | 1.71e-01 | 7.51e-02 | 4.82e-02 | 1.43e-01 | 9.05e-02 | 6.17e-04 | 4.70e-02 | 9.22e-03 | ] |
| T [ | -2.74e-03 | -5.09e-04 | -5.32e-03 | -2.38e-03 | 1.76e-02 | -2.46e-03 | -4.05e-04 | -8.40e-04 | 3.62e-03 | -1.12e-03 | -1.27e-03 | -3.42e-03 | -3.26e-03 | -8.38e-04 | ] |
| A [ | 3083 | 3 | 33822 | 2551 | 7800 | 39018 | 211 | 16117 | 4386 | 1314 | 2996 | 9077 | 19411 | 6347 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 41519 | 47999 | 1507 | 27916 | 18367 | 1106 | 29 | 498 | 2014 | 925 | 4181 | 29862 | 4698 | 20371 | ] |
| G [ | 1550 | 1 | 4506 | 16021 | 3692 | 4262 | 47624 | 30546 | 24728 | 44217 | 35819 | 3580 | 19775 | 14546 | ] |
| T [ | 1852 | 1 | 8168 | 1516 | 18144 | 3618 | 140 | 843 | 16876 | 1547 | 5008 | 5485 | 4120 | 6740 | ] |
