This page shows detailed deep learning-derived predictions and motifs for CTCF in epithelial cell of proximal tubule using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000388.1 |
| Cell line/tissue: | epithelial cell of proximal tubule |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR000DXD |
| Model: | BPNet |
| A [ | -1.45e-03 | -1.36e-03 | 1.99e-02 | -1.47e-03 | -4.03e-03 | 6.33e-02 | -3.44e-04 | 1.03e-02 | -5.05e-03 | -1.24e-03 | -1.96e-03 | -2.97e-03 | 6.59e-03 | -2.28e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 8.09e-02 | 1.44e-01 | 4.65e-04 | 4.76e-02 | 1.54e-02 | -2.98e-04 | -9.18e-05 | -1.84e-04 | -2.43e-04 | -1.26e-04 | 1.54e-03 | 6.18e-02 | 8.09e-04 | 2.52e-02 | ] |
| G [ | -1.58e-03 | -5.10e-04 | 5.44e-03 | 1.08e-02 | -1.88e-03 | 1.24e-03 | 1.51e-01 | 7.36e-02 | 4.86e-02 | 1.34e-01 | 8.61e-02 | 4.29e-04 | 4.24e-02 | 7.60e-03 | ] |
| T [ | -2.45e-03 | -9.83e-04 | -4.39e-03 | -1.88e-03 | 1.66e-02 | -1.91e-03 | -4.24e-04 | -7.79e-04 | 3.79e-03 | -8.54e-04 | -8.95e-04 | -2.43e-03 | -3.27e-03 | -8.69e-04 | ] |
| A [ | 4781 | 692 | 40051 | 3058 | 9534 | 47965 | 159 | 18558 | 5264 | 1104 | 3098 | 11802 | 20691 | 7614 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 48214 | 57715 | 2158 | 33921 | 21732 | 1250 | 19 | 345 | 1979 | 572 | 4631 | 36122 | 5445 | 27320 | ] |
| G [ | 2698 | 114 | 6460 | 19955 | 4509 | 5340 | 58418 | 39037 | 32115 | 55747 | 45040 | 3864 | 28056 | 15601 | ] |
| T [ | 2988 | 160 | 10013 | 1747 | 22907 | 4126 | 85 | 740 | 19323 | 1258 | 5913 | 6893 | 4489 | 8145 | ] |