This page shows detailed deep learning-derived predictions and motifs for CTCF in Panc1 using a single trained BPNet model. Please scroll down the page to browse other models for this transcription factor.
Model details
| Name: | CTCF |
| Model ID: | BP000390.1 |
| Cell line/tissue: | Panc1 |
| Class: | C2H2 zinc finger factors |
| Family: | More than 3 adjacent zinc fingers |
| Best Match(es): | MA0139.2 |
| Taxon: | Vertebrates |
| Species: | Homo sapiens |
| Data Type: | ChIP-seq |
| Uniprot ID: | P49711 |
| Source: | ENCSR203QEB |
| Model: | BPNet |
| A [ | -1.65e-03 | -4.07e-03 | -3.69e-03 | -8.43e-04 | -7.28e-04 | 1.01e-02 | -7.03e-04 | -2.79e-04 | -2.58e-03 | 2.13e-02 | -2.83e-03 | -6.66e-03 | -1.00e-03 | -3.51e-03 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 1.60e-02 | 5.81e-02 | 1.87e-04 | 1.17e-01 | 1.88e-01 | 5.61e-02 | 7.55e-02 | 2.00e-01 | 1.04e-03 | -1.37e-03 | 1.61e-02 | 5.92e-03 | -3.75e-04 | -1.28e-03 | ] |
| G [ | 3.75e-02 | 9.61e-04 | 9.95e-02 | 1.55e-03 | -5.19e-05 | -6.94e-06 | -1.78e-04 | -1.09e-05 | -1.44e-04 | 1.53e-02 | 6.68e-02 | 6.88e-04 | 1.91e-01 | 9.65e-02 | ] |
| T [ | -4.21e-03 | 8.45e-03 | -4.60e-03 | -2.11e-03 | -9.48e-04 | -4.97e-03 | 1.79e-02 | -5.26e-04 | 7.06e-02 | -6.85e-03 | -2.40e-03 | 2.23e-02 | -1.38e-03 | -2.68e-03 | ] |
| A [ | 6401 | 3506 | 4949 | 4789 | 756 | 19227 | 809 | 126 | 4090 | 20718 | 2079 | 8723 | 467 | 4039 | ] |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| C [ | 16399 | 26271 | 2344 | 45503 | 53646 | 30551 | 33565 | 55210 | 4725 | 4945 | 19197 | 7535 | 528 | 4019 | ] |
| G [ | 26853 | 3740 | 39622 | 3192 | 291 | 2067 | 525 | 23 | 1582 | 21152 | 30166 | 3150 | 53469 | 41954 | ] |
| T [ | 5953 | 22089 | 8690 | 2123 | 913 | 3761 | 20707 | 247 | 45209 | 8791 | 4164 | 36197 | 1141 | 5594 | ] |
